RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 TAS2R3Q9NYW6 316 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 CALYQ9NYX4 217 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 OR6C3Q9NZP0 311 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 COMMD3Q9UBI1 195 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 SOX21Q9Y651 276 aaPredicted RBP10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 TRBV6-6A0A0A6YYG2 114 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 CENPVL3A0A0U1RRI6 287 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 KBTBD11-OT1A0A1B0GTJ5 212 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 A6NHS1 94 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 ZNF729A6NN14 1252 aaPredicted RBP10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 C12orf77C9JDV5 145 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 NPIPB11E5RHQ5 1161 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 HPGDSO60760 199 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 CLPXO76031 633 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 RBP4P02753 201 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 IGHV1-8P0DP01 117 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 OMGP23515 440 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 CDK2P24941 298 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 TUSC1Q2TAM9 212 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 TRAPPC6BQ86SZ2 158 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 IZUMO1Q8IYV9 350 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 PNKDQ8N490 385 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 UBALD1Q8TB05 177 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 ACOT12Q8WYK0 555 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 LHX4Q969G2 390 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 KIRREL1Q96J84 757 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 DCUN1D5Q9BTE7 237 aa10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 NXF2Q9GZY0 626 aaKnown RBP10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 METTL8Q9H825 291 aaKnown RBP10.14□□□□□ -0.79
HLA-DQB1-203ENST00000399082 NAV3Q8IVL0 2385 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 A0A075B6Q4 140 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 TMEM235A6NFC5 223 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 CTDSP2O14595 271 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 SSX5O60225 188 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 CRLF1O75462 422 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 PTHLHP12272 177 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 ELK1P19419 428 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 HMGN3Q15651 99 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 FAM189A2Q15884 450 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 CDNFQ49AH0 187 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 RUSC1-AS1Q66K80 236 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 HEPN1Q6WQI6 88 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 PDZD9Q8IXQ8 264 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 OR1L1Q8NH94 360 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 RFESDQ8TAC1 157 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 GAL3ST2Q9H3Q3 398 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 C12orf4Q9NQ89 552 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 ZNF69Q9UC07 566 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 CDC42EP3Q9UKI2 254 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 TRAPPC2LQ9UL33 140 aa10.13□□□□□ -0.79
HLA-DQB1-203ENST00000399082 TRAV18A0A075B6X5 111 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 A0A0A6YYH2 397 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 A0A1W2PPH5 198 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 A6NJ64 397 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 SERPINE3A8MV23 424 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 XRCC3O43542 346 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 ORC5O43913 435 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 SCGNO76038 276 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 APOA1P02647 267 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 SOX6P35712 828 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 TAS2R20P59543 309 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 LDLRAD2Q5SZI1 272 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 BRD3OSQ6XYD6 125 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 LAX1Q8IWV1 398 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 BCL6BQ8N143 479 aaPredicted RBP10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 NANPQ8TBE9 248 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 NUDCD2Q8WVJ2 157 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 AP3S1Q92572 193 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 DGCR14Q96DF8 476 aaKnown RBP10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 AJUBAQ96IF1 538 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 CMTM3Q96MX0 182 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 CMSS1Q9BQ75 279 aaKnown RBP10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 AUNIPQ9H7T9 357 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 Q9N2K0 584 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 NDUFA13Q9P0J0 144 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 SESN1Q9Y6P5 492 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 CUBNO60494 3623 aa10.12□□□□□ -0.79
HLA-DQB1-203ENST00000399082 ZFHX3Q15911 3703 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 NF1P21359 2839 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 IGKV1D-8A0A087WSZ0 117 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 IGHV1-69DA0A0B4J2H0 117 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 A0A1W2PRD5 423 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 A0A1W2PRF3 423 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 A0A1W2PRM7 423 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 FAM172BPA6NC97 362 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 ODF3BA8MYP8 253 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 F2RL2O00254 374 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 IGHV1-69P01742 117 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 HLA-DQB1P01920 261 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 HBZP02008 142 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 MELTFP08582 738 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 FCGR3AP08637 254 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 GSTP1P09211 210 aaKnown RBP10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 GZMHP20718 246 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 COX7A1P24310 79 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 LOXL3P58215 753 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 MADCAM1Q13477 382 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 HACD4Q5VWC8 232 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 ZNF565Q8N9K5 539 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms