RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 A0A1W2PPE3 182 aa11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 WI2-2373I1.2A0A1W2PRP0 233 aa11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 ZNF780AO75290 641 aaPredicted RBP11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 IGHG2P01859 326 aa11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 GAPDHP04406 335 aaKnown RBP11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 GZMHP20718 246 aa11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 SERPINA2P20848 420 aa11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 IL3RAP26951 378 aa11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 BDKRB2P30411 391 aa11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 MPV17LQ2QL34 196 aa11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 VAX1Q5SQQ9 334 aa11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 XAF1Q6GPH4 301 aa11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 C8orf86Q6ZUL3 223 aa11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 MOB3BQ86TA1 216 aa11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 IZUMO1Q8IYV9 350 aa11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 KLHL30-AS1Q8NEE0 82 aa11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 NEK7Q8TDX7 302 aa11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 APH1BQ8WW43 257 aa11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 SLC29A1Q99808 456 aa11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 FGF20Q9NP95 211 aaPredicted RBP11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 ZNF581Q9P0T4 197 aa11.29□□□□□ -0.6
SNRNP25-203ENST00000397876 IGHV1-3A0A0C4DH29 117 aa11.28□□□□□ -0.6
SNRNP25-203ENST00000397876 IRGMA1A4Y4 181 aa11.28□□□□□ -0.6
SNRNP25-203ENST00000397876 SDCBPO00560 298 aaPredicted RBP11.28□□□□□ -0.6
SNRNP25-203ENST00000397876 GEMIN2O14893 280 aaKnown RBP11.28□□□□□ -0.6
SNRNP25-203ENST00000397876 DCKP27707 260 aa11.28□□□□□ -0.6
SNRNP25-203ENST00000397876 MYCNOSP40205 109 aa11.28□□□□□ -0.6
SNRNP25-203ENST00000397876 REG1BP48304 166 aa11.28□□□□□ -0.6
SNRNP25-203ENST00000397876 RIPK1Q13546 671 aa11.28□□□□□ -0.6
SNRNP25-203ENST00000397876 EBI3Q14213 229 aa11.28□□□□□ -0.6
SNRNP25-203ENST00000397876 ATAD3CQ5T2N8 411 aa11.28□□□□□ -0.6
SNRNP25-203ENST00000397876 PQLC1Q8N2U9 271 aa11.28□□□□□ -0.6
SNRNP25-203ENST00000397876 STPG2Q8N412 459 aa11.28□□□□□ -0.6
SNRNP25-203ENST00000397876 ZNF555Q8NEP9 628 aa11.28□□□□□ -0.6
SNRNP25-203ENST00000397876 OR52M1Q8NGK5 317 aa11.28□□□□□ -0.6
SNRNP25-203ENST00000397876 ARL11Q969Q4 196 aa11.28□□□□□ -0.6
SNRNP25-203ENST00000397876 SMIM19Q96E16 107 aa11.28□□□□□ -0.6
SNRNP25-203ENST00000397876 LINC00527Q9UJ94 153 aa11.28□□□□□ -0.6
SNRNP25-203ENST00000397876 IGHV3-72A0A0B4J1Y9 119 aa11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 NCBP2LA6PVI3 153 aaKnown RBP11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 AP4M1O00189 453 aa11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 ORC5O43913 435 aa11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 GTF2F2P13984 249 aa11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 MYL12AP19105 171 aa11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 ETV1P50549 477 aa11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 DCTN2Q13561 401 aaKnown RBP11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 SMN1Q16637 294 aaKnown RBP11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 SLC22A6Q4U2R8 563 aa11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 OR2G6Q5TZ20 316 aa11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 TGIF2LXQ8IUE1 241 aa11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 STX19Q8N4C7 294 aa11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 LINC00311Q8N616 119 aa11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 C8orf31Q8N9H6 132 aa11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 OR2T10Q8NGZ9 312 aa11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 CCDC107Q8WV48 283 aa11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 EAF1Q96JC9 268 aaPredicted RBP11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 ZNF184Q99676 751 aaPredicted RBP11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 S100A14Q9HCY8 104 aa11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 RAB9BQ9NP90 201 aa11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 LIN7CQ9NUP9 197 aaKnown RBP11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 GFOD1Q9NXC2 390 aa11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 CKLFQ9UBR5 152 aa11.27□□□□□ -0.61
SNRNP25-203ENST00000397876 C15orf65H3BRN8 121 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 AIPO00170 330 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 WBP4O75554 376 aaKnown RBP11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 GPR12P47775 334 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 CD69Q07108 199 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 MED21Q13503 144 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 GPR176Q14439 515 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 C11orf87Q6NUJ2 197 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 TEX38Q6PEX7 206 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 UNQ9370/PRO34162Q6UXP9 181 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 ZNF497Q6ZNH5 498 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 C18orf65Q6ZTR6 163 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 ZNF695Q8IW36 515 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 OR13C5Q8NGS8 318 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 UBALD1Q8TB05 177 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 RTN4IP1Q8WWV3 396 aaPredicted RBP11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 RDH12Q96NR8 316 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 P2RX4Q99571 388 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 GON7Q9BXV9 100 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 ABCG5Q9H222 651 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 SPACA1Q9HBV2 294 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 BABAM2Q9NXR7 383 aa11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 SMPD3Q9NY59 655 aaPredicted RBP11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 ZMAT5Q9UDW3 170 aaKnown RBP11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 EXOSC1Q9Y3B2 195 aaKnown RBP11.26□□□□□ -0.61
SNRNP25-203ENST00000397876 IGHV3-43A0A0B4J1X8 118 aa11.25□□□□□ -0.61
SNRNP25-203ENST00000397876 A0A1W2PP11 408 aa11.25□□□□□ -0.61
SNRNP25-203ENST00000397876 OGG1O15527 345 aa11.25□□□□□ -0.61
SNRNP25-203ENST00000397876 SPINT2O43291 252 aa11.25□□□□□ -0.61
SNRNP25-203ENST00000397876 TXNL1O43396 289 aa11.25□□□□□ -0.61
SNRNP25-203ENST00000397876 IGHV3-43DP0DP04 118 aa11.25□□□□□ -0.61
SNRNP25-203ENST00000397876 TMEM30BQ3MIR4 351 aa11.25□□□□□ -0.61
SNRNP25-203ENST00000397876 Q3ZCU0 254 aa11.25□□□□□ -0.61
SNRNP25-203ENST00000397876 Q8N6K4 173 aa11.25□□□□□ -0.61
SNRNP25-203ENST00000397876 ORAI1Q96D31 301 aa11.25□□□□□ -0.61
SNRNP25-203ENST00000397876 CHCHD3Q9NX63 227 aaKnown RBP11.25□□□□□ -0.61
SNRNP25-203ENST00000397876 GNG12Q9UBI6 72 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms