RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ELP2Q6IA86 826 aa16.32■□□□□ 0.2
PDLIM2-204ENST00000397760 RNF141Q8WVD5 230 aa16.32■□□□□ 0.2
PDLIM2-204ENST00000397760 ZNF488Q96MN9 340 aa16.32■□□□□ 0.2
PDLIM2-204ENST00000397760 ST6GALNAC5Q9BVH7 336 aa16.32■□□□□ 0.2
PDLIM2-204ENST00000397760 EHFQ9NZC4 300 aa16.32■□□□□ 0.2
PDLIM2-204ENST00000397760 ZDHHC8Q9ULC8 765 aa16.32■□□□□ 0.2
PDLIM2-204ENST00000397760 HSF4Q9ULV5 492 aa16.32■□□□□ 0.2
PDLIM2-204ENST00000397760 ZNF462Q96JM2 2506 aa16.32■□□□□ 0.2
PDLIM2-204ENST00000397760 A6NLC8 198 aa16.31■□□□□ 0.2
PDLIM2-204ENST00000397760 TSPAN4O14817 238 aa16.31■□□□□ 0.2
PDLIM2-204ENST00000397760 IGHV1-46P01743 117 aa16.31■□□□□ 0.2
PDLIM2-204ENST00000397760 GABRR1P24046 479 aa16.31■□□□□ 0.2
PDLIM2-204ENST00000397760 PIGYQ3MUY2 71 aa16.31■□□□□ 0.2
PDLIM2-204ENST00000397760 C11orf53Q8IXP5 236 aa16.31■□□□□ 0.2
PDLIM2-204ENST00000397760 OR2V2Q96R30 315 aa16.31■□□□□ 0.2
PDLIM2-204ENST00000397760 TLNRD1Q9H1K6 362 aa16.31■□□□□ 0.2
PDLIM2-204ENST00000397760 UFSP2Q9NUQ7 469 aa16.31■□□□□ 0.2
PDLIM2-204ENST00000397760 C14orf166Q9Y224 244 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-204ENST00000397760 ST3GAL6Q9Y274 331 aa16.31■□□□□ 0.2
PDLIM2-204ENST00000397760 KMT2BQ9UMN6 2715 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-204ENST00000397760 TAAR5O14804 337 aa16.31■□□□□ 0.2
PDLIM2-204ENST00000397760 TAF9Q16594 264 aa16.31■□□□□ 0.2
PDLIM2-204ENST00000397760 MEGF10Q96KG7 1140 aa16.31■□□□□ 0.2
PDLIM2-204ENST00000397760 ANKHD1Q8IWZ3 2542 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-204ENST00000397760 TRIM77I1YAP6 450 aa16.3■□□□□ 0.2
PDLIM2-204ENST00000397760 APOC3P02656 99 aa16.3■□□□□ 0.2
PDLIM2-204ENST00000397760 RBM11P57052 281 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-204ENST00000397760 FGF12P61328 243 aa16.3■□□□□ 0.2
PDLIM2-204ENST00000397760 SLC9A3R2Q15599 337 aa16.3■□□□□ 0.2
PDLIM2-204ENST00000397760 ANKRD55Q3KP44 614 aa16.3■□□□□ 0.2
PDLIM2-204ENST00000397760 ZNF826PQ6ZT77 177 aa16.3■□□□□ 0.2
PDLIM2-204ENST00000397760 POC1AQ8NBT0 407 aa16.3■□□□□ 0.2
PDLIM2-204ENST00000397760 BPIFCQ8NFQ6 507 aa16.3■□□□□ 0.2
PDLIM2-204ENST00000397760 POM121Q96HA1 1249 aa16.3■□□□□ 0.2
PDLIM2-204ENST00000397760 CYTL1Q9NRR1 136 aa16.3■□□□□ 0.2
PDLIM2-204ENST00000397760 C1orf123Q9NWV4 160 aa16.3■□□□□ 0.2
PDLIM2-204ENST00000397760 PCDHB10Q9UN67 800 aa16.3■□□□□ 0.2
PDLIM2-204ENST00000397760 H0YIZ8 118 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 GEMIN2O14893 280 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 PTBP3O95758 552 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 PGA5P0DJD9 388 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 ATF4P18848 351 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 TNFSF4P23510 183 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 DTYMKP23919 212 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 TNFAIP6P98066 277 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 EFNB3Q15768 340 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 EIF5AL1Q6IS14 154 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 ITLN1Q8WWA0 313 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 DIRC2Q96SL1 478 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 METTL8Q9H825 291 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 RHOFQ9HBH0 211 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 C12orf4Q9NQ89 552 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 C17orf100A8MU93 164 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 B9A039 149 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 CTSDP07339 412 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 PRKACAP17612 351 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 MST1LQ2TV78 715 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 SPRNQ5BIV9 151 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 FAM122CQ6P4D5 195 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 MEX3BQ6ZN04 569 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 Q8IYB0 196 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 FAM58AQ8N1B3 248 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 OR5T2Q8NGG2 359 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 PLEKHJ1Q9NW61 149 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 IL19Q9UHD0 177 aa16.29■□□□□ 0.2
PDLIM2-204ENST00000397760 SPTBN1Q01082 2364 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-204ENST00000397760 C3orf80F5H4A9 247 aa16.28■□□□□ 0.2
PDLIM2-204ENST00000397760 IFNA2P01563 188 aa16.28■□□□□ 0.2
PDLIM2-204ENST00000397760 ADH4P08319 380 aa16.28■□□□□ 0.2
PDLIM2-204ENST00000397760 ACAA1P09110 424 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-204ENST00000397760 ERVK11-1P61568 191 aa16.28■□□□□ 0.2
PDLIM2-204ENST00000397760 SRSF1Q07955 248 aaKnown RBP eCLIP16.28■□□□□ 0.2
PDLIM2-204ENST00000397760 PDCD1Q15116 288 aa16.28■□□□□ 0.2
PDLIM2-204ENST00000397760 WDR82Q6UXN9 313 aa16.28■□□□□ 0.2
PDLIM2-204ENST00000397760 MUC15Q8N387 334 aa16.28■□□□□ 0.2
PDLIM2-204ENST00000397760 ARL11Q969Q4 196 aa16.28■□□□□ 0.2
PDLIM2-204ENST00000397760 SAT2Q96F10 170 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-204ENST00000397760 RRNAD1Q96FB5 475 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-204ENST00000397760 NRIP2Q9BQI9 281 aa16.28■□□□□ 0.2
PDLIM2-204ENST00000397760 MS4A7Q9GZW8 240 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-204ENST00000397760 ZC4H2Q9NQZ6 224 aa16.28■□□□□ 0.2
PDLIM2-204ENST00000397760 ZNF581Q9P0T4 197 aa16.28■□□□□ 0.2
PDLIM2-204ENST00000397760 KLF2Q9Y5W3 355 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-204ENST00000397760 PLCE1Q9P212 2302 aa16.27■□□□□ 0.2
PDLIM2-204ENST00000397760 ADAP1O75689 374 aa16.27■□□□□ 0.2
PDLIM2-204ENST00000397760 CTRB1P17538 263 aa16.27■□□□□ 0.2
PDLIM2-204ENST00000397760 GLRA1P23415 457 aa16.27■□□□□ 0.2
PDLIM2-204ENST00000397760 DAZAP2Q15038 168 aaPredicted RBP16.27■□□□□ 0.2
PDLIM2-204ENST00000397760 CTRB2Q6GPI1 263 aa16.27■□□□□ 0.2
PDLIM2-204ENST00000397760 IL34Q6ZMJ4 242 aa16.27■□□□□ 0.2
PDLIM2-204ENST00000397760 ZCCHC24Q8N2G6 241 aaKnown RBP16.27■□□□□ 0.2
PDLIM2-204ENST00000397760 OR1S2Q8NGQ3 325 aa16.27■□□□□ 0.2
PDLIM2-204ENST00000397760 DYNLRB1Q9NP97 96 aa16.27■□□□□ 0.2
PDLIM2-204ENST00000397760 IL36RNQ9UBH0 155 aa16.27■□□□□ 0.2
PDLIM2-204ENST00000397760 TMEM218A2RU14 115 aa16.26■□□□□ 0.19
PDLIM2-204ENST00000397760 NXPH2O95156 264 aa16.26■□□□□ 0.19
PDLIM2-204ENST00000397760 RBMXP38159 391 aaKnown RBP16.26■□□□□ 0.19
PDLIM2-204ENST00000397760 NKAPLQ5M9Q1 402 aa16.26■□□□□ 0.19
PDLIM2-204ENST00000397760 MOGAT3Q86VF5 341 aa16.26■□□□□ 0.19
PDLIM2-204ENST00000397760 SGPP2Q8IWX5 399 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms