RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 K7EM74 188 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 DFFBO76075 338 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 GLCCI1Q86VQ1 547 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 FAM90A1Q86YD7 464 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 OR4S2Q8NH73 311 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 NEIL1Q96FI4 390 aaPredicted RBP7.06□□□□□ -1.28
PTPRD-204ENST00000397606 LYZL4Q96KX0 146 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 TREM1Q9NP99 234 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 KCNIP2Q9NS61 270 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 GPR37O15354 613 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 IGHV3-13P01766 116 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 IGHV3-7P01780 117 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 SULT1A3P0DMM9 295 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 SULT1A4P0DMN0 295 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 DHRS2Q13268 280 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 ATPAF1Q5TC12 328 aaPredicted RBP7.05□□□□□ -1.28
PTPRD-204ENST00000397606 MBNL2Q5VZF2 373 aaKnown RBP7.05□□□□□ -1.28
PTPRD-204ENST00000397606 ZNF767PQ75MW2 155 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 TGIF2LYQ8IUE0 185 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 TGIF2LXQ8IUE1 241 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 PDZD9Q8IXQ8 264 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 CADM3Q8N126 398 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 TPRX1Q8N7U7 411 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 DUSP18Q8NEJ0 188 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 ZNF596Q8TC21 504 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 PNRC2Q9NPJ4 139 aaKnown RBP7.05□□□□□ -1.28
PTPRD-204ENST00000397606 SPTBN1Q01082 2364 aaKnown RBP7.05□□□□□ -1.28
PTPRD-204ENST00000397606 MED19A0JLT2 244 aaPredicted RBP7.05□□□□□ -1.28
PTPRD-204ENST00000397606 DAOP14920 347 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 ZNF14P17017 642 aaPredicted RBP7.05□□□□□ -1.28
PTPRD-204ENST00000397606 KITLGP21583 273 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 CHATP28329 748 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 NKX6-1P78426 367 aaPredicted RBP7.05□□□□□ -1.28
PTPRD-204ENST00000397606 KLF9Q13886 244 aaPredicted RBP7.05□□□□□ -1.28
PTPRD-204ENST00000397606 TMEM30BQ3MIR4 351 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 SP6Q3SY56 376 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 MOGAT2Q3SYC2 334 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 VAX1Q5SQQ9 334 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 CALHM1Q8IU99 346 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 TEX29Q8N6K0 151 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.05□□□□□ -1.28
PTPRD-204ENST00000397606 ZNF485Q8NCK3 441 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 PLEKHA3Q9HB20 300 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 LPAR2Q9HBW0 351 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 PCNX1Q96RV3 2341 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 HTTP42858 3142 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 TNFSF13O75888 250 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 NXPH3O95157 252 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 LY86O95711 162 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 OTX1P32242 354 aaPredicted RBP7.05□□□□□ -1.28
PTPRD-204ENST00000397606 LPAR6P43657 344 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 SCGB2A2Q13296 93 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 PPP1R1AQ13522 171 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 STUMQ69YW2 141 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 ACP7Q6ZNF0 438 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 OR1S2Q8NGQ3 325 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 LILRB1Q8NHL6 650 aaPredicted RBP7.05□□□□□ -1.28
PTPRD-204ENST00000397606 VSTM2AQ8TAG5 236 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 MARVELD1Q9BSK0 173 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 TMEM165Q9HC07 324 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 A0A1W2PPV4 95 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 SHISA3A0PJX4 238 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 NCBP2LA6PVI3 153 aaKnown RBP7.05□□□□□ -1.28
PTPRD-204ENST00000397606 DUS4LO95620 317 aaKnown RBP7.05□□□□□ -1.28
PTPRD-204ENST00000397606 IGKV3-15P01624 115 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 FABP1P07148 127 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 CCDC144NLQ6NUI1 221 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 RPRMLQ8N4K4 120 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 LRRC20Q8TCA0 184 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 HSD17B10Q99714 261 aaKnown RBP7.05□□□□□ -1.28
PTPRD-204ENST00000397606 SLC35D1Q9NTN3 355 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 FAM215AQ9Y5M1 114 aa7.05□□□□□ -1.28
PTPRD-204ENST00000397606 RTTNQ86VV8 2226 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 OR5H14A6NHG9 310 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 E5RGE8 158 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 HBZP02008 142 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 S100A1P23297 94 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 CEBPDP49716 269 aaPredicted RBP7.04□□□□□ -1.28
PTPRD-204ENST00000397606 UBA52P62987 128 aaKnown RBP7.04□□□□□ -1.28
PTPRD-204ENST00000397606 OR52B4Q8NGK2 314 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 ARPC5LQ9BPX5 153 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 PBDC1Q9BVG4 233 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 RAB18Q9NP72 206 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 NSG2Q9Y328 171 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 ICMTO60725 284 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 RHBDL1O75783 438 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 TMEM217Q8N7C4 229 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 WDR31Q8NA23 367 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 NUP37Q8NFH4 326 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 SPSB4Q96A44 273 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 C14orf79Q96F83 325 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 PCGF1Q9BSM1 259 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 PLEKHA2Q9HB19 425 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 RALYQ9UKM9 306 aaKnown RBP7.04□□□□□ -1.28
PTPRD-204ENST00000397606 INSIG2Q9Y5U4 225 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 C9orf170A2RU37 121 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 H0YL77 283 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 P2RX3P56373 397 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 BLOC1S1P78537 153 aa7.04□□□□□ -1.28
PTPRD-204ENST00000397606 RPL19P84098 196 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms