RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 SOSTQ9BQB4 213 aa19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 MBNL3Q9NUK0 354 aaKnown RBP19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 TAS2R3Q9NYW6 316 aa19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 KCNIP1Q9NZI2 227 aa19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 ZNF230Q9UIE0 474 aaPredicted RBP19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 MEIOCA2RUB1 952 aa19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 ZNF729A6NN14 1252 aaPredicted RBP19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 ZNF728P0DKX0 622 aa19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 GZMHP20718 246 aa19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 DTYMKP23919 212 aa19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 CR1LQ2VPA4 569 aa19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 GAL3ST2Q9H3Q3 398 aa19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 Q9N2K0 584 aa19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 FLNAP21333 2647 aaKnown RBP19.41■□□□□ 0.7
TSPAN4-203ENST00000397397 MEIS3P1A6NDR6 274 aa19.41■□□□□ 0.7
TSPAN4-203ENST00000397397 POM121CA8CG34 1229 aa19.41■□□□□ 0.7
TSPAN4-203ENST00000397397 DLX6P56179 175 aa19.41■□□□□ 0.7
TSPAN4-203ENST00000397397 RNASE12Q5GAN4 147 aaKnown RBP19.41■□□□□ 0.7
TSPAN4-203ENST00000397397 TRAT1Q6PIZ9 186 aa19.41■□□□□ 0.7
TSPAN4-203ENST00000397397 MAFIPQ8WZ33 124 aa19.41■□□□□ 0.7
TSPAN4-203ENST00000397397 ST6GALNAC5Q9BVH7 336 aa19.41■□□□□ 0.7
TSPAN4-203ENST00000397397 CALYQ9NYX4 217 aa19.41■□□□□ 0.7
TSPAN4-203ENST00000397397 OPN4Q9UHM6 478 aa19.41■□□□□ 0.7
TSPAN4-203ENST00000397397 V9GYH0 126 aa19.41■□□□□ 0.7
TSPAN4-203ENST00000397397 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.4■□□□□ 0.73e-9■■■□□ 17.3
TSPAN4-203ENST00000397397 ORC5O43913 435 aa19.4■□□□□ 0.7
TSPAN4-203ENST00000397397 LPLP06858 475 aa19.4■□□□□ 0.7
TSPAN4-203ENST00000397397 CGB3P0DN86 165 aa19.4■□□□□ 0.7
TSPAN4-203ENST00000397397 CGB7P0DN87 165 aa19.4■□□□□ 0.7
TSPAN4-203ENST00000397397 GATA3P23771 443 aa19.4■□□□□ 0.7
TSPAN4-203ENST00000397397 SSTR5P35346 364 aa19.4■□□□□ 0.7
TSPAN4-203ENST00000397397 ETV6P41212 452 aa19.4■□□□□ 0.7
TSPAN4-203ENST00000397397 CBX5P45973 191 aa19.4■□□□□ 0.7
TSPAN4-203ENST00000397397 C17orf58Q2M2W7 97 aa19.4■□□□□ 0.7
TSPAN4-203ENST00000397397 LINC00299Q6ZSB3 139 aa19.4■□□□□ 0.7
TSPAN4-203ENST00000397397 KIR3DL3Q8N743 410 aa19.4■□□□□ 0.7
TSPAN4-203ENST00000397397 ARL11Q969Q4 196 aa19.4■□□□□ 0.7
TSPAN4-203ENST00000397397 SCPEP1Q9HB40 452 aa19.4■□□□□ 0.7
TSPAN4-203ENST00000397397 TAF9BQ9HBM6 251 aa19.4■□□□□ 0.7
TSPAN4-203ENST00000397397 MGAT4AQ9UM21 535 aa19.4■□□□□ 0.7
TSPAN4-203ENST00000397397 KBTBD11-OT1A0A1B0GTJ5 212 aa19.39■□□□□ 0.69
TSPAN4-203ENST00000397397 C12orf77C9JDV5 145 aa19.39■□□□□ 0.69
TSPAN4-203ENST00000397397 M0R1W7 72 aa19.39■□□□□ 0.69
TSPAN4-203ENST00000397397 SULT1C2O00338 296 aa19.39■□□□□ 0.69
TSPAN4-203ENST00000397397 PAX8Q06710 450 aa19.39■□□□□ 0.69
TSPAN4-203ENST00000397397 KRTAP1-1Q07627 177 aa19.39■□□□□ 0.69
TSPAN4-203ENST00000397397 METTL11BQ5VVY1 283 aa19.39■□□□□ 0.69
TSPAN4-203ENST00000397397 FAHD2BQ6P2I3 314 aaPredicted RBP19.39■□□□□ 0.69
TSPAN4-203ENST00000397397 C5orf24Q7Z6I8 188 aa19.39■□□□□ 0.69
TSPAN4-203ENST00000397397 PRR18Q8N4B5 295 aa19.39■□□□□ 0.69
TSPAN4-203ENST00000397397 RFESDQ8TAC1 157 aa19.39■□□□□ 0.69
TSPAN4-203ENST00000397397 UBALD1Q8TB05 177 aa19.39■□□□□ 0.69
TSPAN4-203ENST00000397397 GPX8Q8TED1 209 aa19.39■□□□□ 0.69
TSPAN4-203ENST00000397397 FAHD2AQ96GK7 314 aa19.39■□□□□ 0.69
TSPAN4-203ENST00000397397 OCSTAMPQ9BR26 566 aa19.39■□□□□ 0.69
TSPAN4-203ENST00000397397 IFT46Q9NQC8 304 aa19.39■□□□□ 0.69
TSPAN4-203ENST00000397397 KPTNQ9Y664 436 aa19.39■□□□□ 0.69
TSPAN4-203ENST00000397397 hCG_1809904A0A1W2PP81 198 aa19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 A0A1W2PPE2 198 aa19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 A0A1W2PR64 198 aa19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 A0A1W2PRV1 198 aa19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 C17orf98A8MV24 154 aa19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 SPINT2O43291 252 aa19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 CD5LO43866 347 aa19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 PTBP1P26599 531 aaKnown RBP eCLIP19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 ERVFRD-1P60508 538 aa19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 HLA-DRB3P79483 266 aa19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 MRPS10P82664 201 aaKnown RBP19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 HMGN3Q15651 99 aa19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 PYDC2Q56P42 97 aa19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 GVQW1Q8N7I0 195 aa19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 OR52I2Q8NH67 350 aa19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 FCAMRQ8WWV6 532 aa19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 GSX1Q9H4S2 264 aaPredicted RBP19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 ZNF286AQ9HBT8 521 aa19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 RAB9BQ9NP90 201 aa19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 WNK2Q9Y3S1 2297 aa19.38■□□□□ 0.69
TSPAN4-203ENST00000397397 TRDCB7Z8K6 153 aa19.37■□□□□ 0.69
TSPAN4-203ENST00000397397 C15orf65H3BRN8 121 aa19.37■□□□□ 0.69
TSPAN4-203ENST00000397397 CTDSPLO15194 276 aa19.37■□□□□ 0.69
TSPAN4-203ENST00000397397 HBZP02008 142 aa19.37■□□□□ 0.69
TSPAN4-203ENST00000397397 FCER2P06734 321 aa19.37■□□□□ 0.69
TSPAN4-203ENST00000397397 FOSL1P15407 271 aa19.37■□□□□ 0.69
TSPAN4-203ENST00000397397 OMGP23515 440 aa19.37■□□□□ 0.69
TSPAN4-203ENST00000397397 DGCR2P98153 550 aa19.37■□□□□ 0.69
TSPAN4-203ENST00000397397 SRSF7Q16629 238 aaKnown RBP eCLIP19.37■□□□□ 0.69
TSPAN4-203ENST00000397397 PRAMEF5Q5TYX0 476 aa19.37■□□□□ 0.69
TSPAN4-203ENST00000397397 ZNF554Q86TJ5 538 aa19.37■□□□□ 0.69
TSPAN4-203ENST00000397397 Q8N7P7 452 aa19.37■□□□□ 0.69
TSPAN4-203ENST00000397397 OR1L1Q8NH94 360 aa19.37■□□□□ 0.69
TSPAN4-203ENST00000397397 SIRPDQ9H106 197 aa19.37■□□□□ 0.69
TSPAN4-203ENST00000397397 IDI2-AS1Q9NZ38 188 aa19.37■□□□□ 0.69
TSPAN4-203ENST00000397397 ABCA1O95477 2261 aa19.37■□□□□ 0.69
TSPAN4-203ENST00000397397 NPIPB11E5RHQ5 1161 aa19.36■□□□□ 0.69
TSPAN4-203ENST00000397397 GABARAPH6UMI1 98 aa19.36■□□□□ 0.69
TSPAN4-203ENST00000397397 TOX4O94842 621 aa19.36■□□□□ 0.69
TSPAN4-203ENST00000397397 RBP4P02753 201 aa19.36■□□□□ 0.69
TSPAN4-203ENST00000397397 ZNF79Q15937 498 aa19.36■□□□□ 0.69
TSPAN4-203ENST00000397397 LTC4SQ16873 150 aa19.36■□□□□ 0.69
TSPAN4-203ENST00000397397 C1orf122Q6ZSJ8 110 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms