RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 FAM234AQ9H0X4 552 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 KIF25Q9UIL4 384 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 PCDHB10Q9UN67 800 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 MGST3O14880 152 aa10.58□□□□□ -0.72
TRIM39-204ENST00000396548 SIGLEC5O15389 551 aa10.58□□□□□ -0.72
TRIM39-204ENST00000396548 GYPAP02724 150 aa10.58□□□□□ -0.72
TRIM39-204ENST00000396548 SULT1A3P0DMM9 295 aa10.58□□□□□ -0.72
TRIM39-204ENST00000396548 SULT1A4P0DMN0 295 aa10.58□□□□□ -0.72
TRIM39-204ENST00000396548 CGB3P0DN86 165 aa10.58□□□□□ -0.72
TRIM39-204ENST00000396548 CGB7P0DN87 165 aa10.58□□□□□ -0.72
TRIM39-204ENST00000396548 SELLP14151 372 aa10.58□□□□□ -0.72
TRIM39-204ENST00000396548 RPS2P15880 293 aaKnown RBP10.58□□□□□ -0.72
TRIM39-204ENST00000396548 ERP29P30040 261 aaKnown RBP10.58□□□□□ -0.72
TRIM39-204ENST00000396548 FCGR2CP31995 323 aa10.58□□□□□ -0.72
TRIM39-204ENST00000396548 ECI1P42126 302 aa10.58□□□□□ -0.72
TRIM39-204ENST00000396548 KRBOX4Q5JUW0 171 aa10.58□□□□□ -0.72
TRIM39-204ENST00000396548 C15orf65H3BRN8 121 aa10.58□□□□□ -0.72
TRIM39-204ENST00000396548 RLN1P04808 185 aa10.58□□□□□ -0.72
TRIM39-204ENST00000396548 CTXN2P0C2S0 81 aa10.58□□□□□ -0.72
TRIM39-204ENST00000396548 H1FOOQ8IZA3 346 aaPredicted RBP10.58□□□□□ -0.72
TRIM39-204ENST00000396548 MUC20Q8N307 709 aaPredicted RBP10.58□□□□□ -0.72
TRIM39-204ENST00000396548 CCL17Q92583 94 aa10.58□□□□□ -0.72
TRIM39-204ENST00000396548 LURAP1Q96LR2 239 aa10.58□□□□□ -0.72
TRIM39-204ENST00000396548 SLC23A1Q9UHI7 598 aa10.58□□□□□ -0.72
TRIM39-204ENST00000396548 PPIAL4EA0A075B759 164 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 PPIAL4DF5H284 164 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 PPIAL4FP0DN26 164 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 AADACP22760 399 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 GABRA2P47869 451 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 SUPT4H1P63272 117 aaKnown RBP10.57□□□□□ -0.72
TRIM39-204ENST00000396548 MRPS11P82912 194 aaKnown RBP10.57□□□□□ -0.72
TRIM39-204ENST00000396548 AKAP14Q86UN6 197 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 C1orf87Q8N0U7 546 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 OR13A1Q8NGR1 328 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 RSRP1Q9BUV0 290 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 ZNF665Q9H7R5 613 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 TRAPPC2LQ9UL33 140 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 PPIAL4AQ9Y536 164 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 TRAV38-1A0A0B4J264 116 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 C12orf77C9JDV5 145 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 HEXAP06865 529 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 BAMBIQ13145 260 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 FCN2Q15485 313 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 TCF23Q7RTU1 214 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 ASCC1Q8N9N2 400 aaKnown RBP10.57□□□□□ -0.72
TRIM39-204ENST00000396548 KIRREL1Q96J84 757 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 CCL13Q99616 98 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 KAAG1Q9UBP8 84 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 CLDN1O95832 211 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 PPYP01298 95 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 NFYAP23511 347 aaPredicted RBP10.57□□□□□ -0.72
TRIM39-204ENST00000396548 UBE2MP61081 183 aaKnown RBP10.57□□□□□ -0.72
TRIM39-204ENST00000396548 PPP1R1AQ13522 171 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 FAM216BQ8N7L0 139 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 TPRX1Q8N7U7 411 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 ZNF431Q8TF32 576 aaPredicted RBP10.57□□□□□ -0.72
TRIM39-204ENST00000396548 VRK1Q99986 396 aaPredicted RBP10.57□□□□□ -0.72
TRIM39-204ENST00000396548 PLEKHF2Q9H8W4 249 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 TAF9BQ9HBM6 251 aa10.57□□□□□ -0.72
TRIM39-204ENST00000396548 ROS1P08922 2347 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 CTSDP07339 412 aaPredicted RBP10.56□□□□□ -0.72
TRIM39-204ENST00000396548 HNRNPCP07910 306 aaKnown RBP eCLIP10.56□□□□□ -0.72
TRIM39-204ENST00000396548 CXCL3P19876 107 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 P2RX3P56373 397 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 DHRS2Q13268 280 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 TMED4Q7Z7H5 227 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 DEFB108BQ8NET1 73 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 OR5D13Q8NGL4 314 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 ING3Q9NXR8 418 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 OR1A1Q9P1Q5 309 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 OPN4Q9UHM6 478 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 RALYQ9UKM9 306 aaKnown RBP10.56□□□□□ -0.72
TRIM39-204ENST00000396548 CHD6Q8TD26 2715 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 C9orf170A2RU37 121 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 OVOL3O00110 214 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 IGHV2-70P01814 119 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 CBX3Q13185 183 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 LYG2Q86SG7 212 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 FGFRL1Q8N441 504 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 SPICQ8N5J4 248 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 DCTN5Q9BTE1 182 aa10.56□□□□□ -0.72
TRIM39-204ENST00000396548 VPS13CQ709C8 3753 aa10.55□□□□□ -0.72
TRIM39-204ENST00000396548 MEIKINA0A087WXM9 373 aa10.55□□□□□ -0.72
TRIM39-204ENST00000396548 IGKV1D-13A0A0B4J2D9 117 aa10.55□□□□□ -0.72
TRIM39-204ENST00000396548 ODAMA1E959 279 aa10.55□□□□□ -0.72
TRIM39-204ENST00000396548 LYNX1G3V0Z9 82 aa10.55□□□□□ -0.72
TRIM39-204ENST00000396548 CREBL2O60519 120 aaPredicted RBP10.55□□□□□ -0.72
TRIM39-204ENST00000396548 IGKV1-13P0DP09 117 aa10.55□□□□□ -0.72
TRIM39-204ENST00000396548 LYNX1P0DP58 116 aa10.55□□□□□ -0.72
TRIM39-204ENST00000396548 SEC61A1P61619 476 aaKnown RBP10.55□□□□□ -0.72
TRIM39-204ENST00000396548 C2orf68Q2NKX9 166 aa10.55□□□□□ -0.72
TRIM39-204ENST00000396548 LYPD2Q6UXB3 125 aa10.55□□□□□ -0.72
TRIM39-204ENST00000396548 SCGB3A2Q96PL1 93 aa10.55□□□□□ -0.72
TRIM39-204ENST00000396548 TMEM246Q9BRR3 403 aa10.55□□□□□ -0.72
TRIM39-204ENST00000396548 RAB1BQ9H0U4 201 aa10.55□□□□□ -0.72
TRIM39-204ENST00000396548 LINC00574Q9H8X3 128 aa10.55□□□□□ -0.72
TRIM39-204ENST00000396548 GPN1Q9HCN4 374 aaPredicted RBP10.55□□□□□ -0.72
TRIM39-204ENST00000396548 BOLA2-SMG1P6H3BVE0 249 aa10.55□□□□□ -0.72
TRIM39-204ENST00000396548 BET1O15155 118 aa10.55□□□□□ -0.72
TRIM39-204ENST00000396548 CCNKO75909 580 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms