RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.47□□□□□ -0.73
VCPKMT-201ENST00000395859 OR8H3Q8N146 312 aa10.47□□□□□ -0.73
VCPKMT-201ENST00000395859 ZNF454Q8N9F8 522 aa10.47□□□□□ -0.73
VCPKMT-201ENST00000395859 OR9G1Q8NH87 305 aa10.47□□□□□ -0.73
VCPKMT-201ENST00000395859 HAVCR2Q8TDQ0 301 aa10.47□□□□□ -0.73
VCPKMT-201ENST00000395859 OTULINQ96BN8 352 aa10.47□□□□□ -0.73
VCPKMT-201ENST00000395859 EAF1Q96JC9 268 aaPredicted RBP10.47□□□□□ -0.73
VCPKMT-201ENST00000395859 GHITMQ9H3K2 345 aa10.47□□□□□ -0.73
VCPKMT-201ENST00000395859 ACOT13Q9NPJ3 140 aa10.47□□□□□ -0.73
VCPKMT-201ENST00000395859 CHCHD3Q9NX63 227 aaKnown RBP10.47□□□□□ -0.73
VCPKMT-201ENST00000395859 RSL24D1Q9UHA3 163 aaKnown RBP10.47□□□□□ -0.73
VCPKMT-201ENST00000395859 ENPP5Q9UJA9 477 aa10.47□□□□□ -0.73
VCPKMT-201ENST00000395859 DIMT1Q9UNQ2 313 aaKnown RBP10.47□□□□□ -0.73
VCPKMT-201ENST00000395859 SLC7A11Q9UPY5 501 aa10.47□□□□□ -0.73
VCPKMT-201ENST00000395859 ERGIC3Q9Y282 383 aa10.47□□□□□ -0.73
VCPKMT-201ENST00000395859 PIGLQ9Y2B2 252 aa10.47□□□□□ -0.73
VCPKMT-201ENST00000395859 EXOSC1Q9Y3B2 195 aaKnown RBP10.47□□□□□ -0.73
VCPKMT-201ENST00000395859 BOLA1Q9Y3E2 137 aa10.47□□□□□ -0.73
VCPKMT-201ENST00000395859 PRKYO43930 277 aa10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 ENTPD6O75354 484 aa10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 BRI3O95415 125 aa10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 HAND1O96004 215 aa10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 HTR1AP08908 422 aa10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 DBTP11182 482 aaKnown RBP10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 MYL12AP19105 171 aa10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 RBM39Q14498 530 aaKnown RBP10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 IRF3Q14653 427 aa10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 TIMM50Q3ZCQ8 353 aa10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 TMEM236Q5W0B7 351 aa10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 AHSA2Q719I0 299 aa10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 TRAPPC6BQ86SZ2 158 aa10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 OTOSQ8NHW6 89 aa10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 TRMT10AQ8TBZ6 339 aaKnown RBP10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 MRPL48Q96GC5 212 aaKnown RBP10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 OR5B12Q96R08 314 aa10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 MND1Q9BWT6 205 aa10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 CCDC90BQ9GZT6 254 aa10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 ALX4Q9H161 411 aaPredicted RBP10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 OR51V1Q9H2C8 321 aa10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 GPR84Q9NQS5 396 aa10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 PAK1IP1Q9NWT1 392 aaPredicted RBP10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 FAM206AQ9NX38 181 aa10.46□□□□□ -0.73
VCPKMT-201ENST00000395859 LRP1BQ9NZR2 4599 aa10.46□□□□□ -0.74
VCPKMT-201ENST00000395859 TRGV10A0A0A0MS01 117 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 FAM90A10PA6NDY2 464 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 ACOD1A6NK06 481 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 FAM183AA6NL82 134 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 LINC01619G3V211 115 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 J3QR06 171 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 CGB3P0DN86 165 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 CGB7P0DN87 165 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 VDAC1P21796 283 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 RAB7AP51149 207 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 LINC00299Q6ZSB3 139 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 ANKRD13BQ86YJ7 626 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 IZUMO1Q8IYV9 350 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 TMEM106AQ96A25 262 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 KIRREL1Q96J84 757 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 CEP19Q96LK0 163 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 TEAD3Q99594 435 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 CHCHD6Q9BRQ6 235 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 KRTAP3-3Q9BYR6 98 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 KRTAP3-2Q9BYR7 98 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 TOLLIPQ9H0E2 274 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 MED20Q9H944 212 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 GPR173Q9NS66 373 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 PTTG2Q9NZH5 202 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 EXOGQ9Y2C4 368 aaKnown RBP10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 KLHDC2Q9Y2U9 406 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 CEPT1Q9Y6K0 416 aa10.45□□□□□ -0.74
VCPKMT-201ENST00000395859 IGKV1-27A0A075B6S5 117 aa10.44□□□□□ -0.74
VCPKMT-201ENST00000395859 A0A1B0GVY2 172 aa10.44□□□□□ -0.74
VCPKMT-201ENST00000395859 DHRS3O75911 302 aa10.44□□□□□ -0.74
VCPKMT-201ENST00000395859 GABRR1P24046 479 aa10.44□□□□□ -0.74
VCPKMT-201ENST00000395859 ZP1P60852 638 aa10.44□□□□□ -0.74
VCPKMT-201ENST00000395859 ZNF146Q15072 292 aa10.44□□□□□ -0.74
VCPKMT-201ENST00000395859 SMN1Q16637 294 aaKnown RBP10.44□□□□□ -0.74
VCPKMT-201ENST00000395859 CLVS2Q5SYC1 327 aa10.44□□□□□ -0.74
VCPKMT-201ENST00000395859 TMEM65Q6PI78 240 aa10.44□□□□□ -0.74
VCPKMT-201ENST00000395859 Q6ZSR3 168 aa10.44□□□□□ -0.74
VCPKMT-201ENST00000395859 IQCF1Q8N6M8 205 aa10.44□□□□□ -0.74
VCPKMT-201ENST00000395859 OR51E1Q8TCB6 317 aa10.44□□□□□ -0.74
VCPKMT-201ENST00000395859 THEM6Q8WUY1 208 aa10.44□□□□□ -0.74
VCPKMT-201ENST00000395859 S1PR3Q99500 378 aa10.44□□□□□ -0.74
VCPKMT-201ENST00000395859 AMMECR1Q9Y4X0 333 aaPredicted RBP10.44□□□□□ -0.74
VCPKMT-201ENST00000395859 IGHV4OR15-8A0A075B7B6 117 aa10.43□□□□□ -0.74
VCPKMT-201ENST00000395859 A0A087WW49 117 aa10.43□□□□□ -0.74
VCPKMT-201ENST00000395859 NCBP2LA6PVI3 153 aaKnown RBP10.43□□□□□ -0.74
VCPKMT-201ENST00000395859 SLC22A1O15245 554 aa10.43□□□□□ -0.74
VCPKMT-201ENST00000395859 MT-ND2P03891 347 aa10.43□□□□□ -0.74
VCPKMT-201ENST00000395859 GLIPR1P48060 266 aa10.43□□□□□ -0.74
VCPKMT-201ENST00000395859 RAB9AP51151 201 aa10.43□□□□□ -0.74
VCPKMT-201ENST00000395859 ZNF816Q0VGE8 651 aaPredicted RBP10.43□□□□□ -0.74
VCPKMT-201ENST00000395859 MADCAM1Q13477 382 aa10.43□□□□□ -0.74
VCPKMT-201ENST00000395859 NEDD8Q15843 81 aa10.43□□□□□ -0.74
VCPKMT-201ENST00000395859 LGALS9CQ6DKI2 356 aa10.43□□□□□ -0.74
VCPKMT-201ENST00000395859 DEGS2Q6QHC5 323 aa10.43□□□□□ -0.74
VCPKMT-201ENST00000395859 TMEM104Q8NE00 496 aa10.43□□□□□ -0.74
VCPKMT-201ENST00000395859 OR4C12Q96R67 309 aa10.43□□□□□ -0.74
VCPKMT-201ENST00000395859 LINC00574Q9H8X3 128 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms