RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 DYNC1I2Q13409 638 aaKnown RBP16.19■□□□□ 0.18
SNCA-203ENST00000394986 LHFPL4Q7Z7J7 247 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 KIRREL1Q96J84 757 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 RAB22AQ9UL26 194 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 FAM96BQ9Y3D0 163 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 IL1AP01583 271 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 TFAP2AP05549 437 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 GLAP06280 429 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 MELTFP08582 738 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 NFYBP25208 207 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 TMEM50BP56557 158 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 NCS1P62166 190 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 MOGAT2Q3SYC2 334 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 MIDNQ504T8 468 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 LDLRAD2Q5SZI1 272 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 Q6YL49 198 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 GAPTQ8N292 157 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 OR11H6Q8NGC7 330 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 JMJD8Q96S16 334 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 MDFIQ99750 246 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 NAA50Q9GZZ1 169 aaKnown RBP16.19■□□□□ 0.18
SNCA-203ENST00000394986 PRDM13Q9H4Q3 707 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 ZNF286AQ9HBT8 521 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 TRAPPC2LQ9UL33 140 aa16.19■□□□□ 0.18
SNCA-203ENST00000394986 H3BUI4 141 aa16.18■□□□□ 0.18
SNCA-203ENST00000394986 PAHP00439 452 aa16.18■□□□□ 0.18
SNCA-203ENST00000394986 IGHV3-7P01780 117 aa16.18■□□□□ 0.18
SNCA-203ENST00000394986 RCC1P18754 421 aaPredicted RBP16.18■□□□□ 0.18
SNCA-203ENST00000394986 UBA52P62987 128 aaKnown RBP16.18■□□□□ 0.18
SNCA-203ENST00000394986 SLC9A3R2Q15599 337 aa16.18■□□□□ 0.18
SNCA-203ENST00000394986 ZNF626Q68DY1 528 aa16.18■□□□□ 0.18
SNCA-203ENST00000394986 SLC16A12Q6ZSM3 486 aa16.18■□□□□ 0.18
SNCA-203ENST00000394986 C5orf24Q7Z6I8 188 aa16.18■□□□□ 0.18
SNCA-203ENST00000394986 MRPL30Q8TCC3 161 aaKnown RBP16.18■□□□□ 0.18
SNCA-203ENST00000394986 LGALS14Q8TCE9 139 aa16.18■□□□□ 0.18
SNCA-203ENST00000394986 LEAP2Q969E1 77 aa16.18■□□□□ 0.18
SNCA-203ENST00000394986 ARHGAP5-AS1Q96IT6 56 aa16.18■□□□□ 0.18
SNCA-203ENST00000394986 CLEC7AQ9BXN2 247 aa16.18■□□□□ 0.18
SNCA-203ENST00000394986 PLEKHJ1Q9NW61 149 aa16.18■□□□□ 0.18
SNCA-203ENST00000394986 IDI2-AS1Q9NZ38 188 aa16.18■□□□□ 0.18
SNCA-203ENST00000394986 ZNRD1Q9P1U0 126 aa16.18■□□□□ 0.18
SNCA-203ENST00000394986 RNF212BA8MTL3 300 aa16.17■□□□□ 0.18
SNCA-203ENST00000394986 NPIPB11E5RHQ5 1161 aa16.17■□□□□ 0.18
SNCA-203ENST00000394986 C15orf65H3BRN8 121 aa16.17■□□□□ 0.18
SNCA-203ENST00000394986 IGHV4-59P01825 116 aa16.17■□□□□ 0.18
SNCA-203ENST00000394986 FBP1P09467 338 aa16.17■□□□□ 0.18
SNCA-203ENST00000394986 RANBP1P43487 201 aa16.17■□□□□ 0.18
SNCA-203ENST00000394986 ALDH3B2P48448 385 aa16.17■□□□□ 0.18
SNCA-203ENST00000394986 LGALS4P56470 323 aa16.17■□□□□ 0.18
SNCA-203ENST00000394986 PLAC9Q5JTB6 97 aa16.17■□□□□ 0.18
SNCA-203ENST00000394986 IDNKQ5T6J7 187 aa16.17■□□□□ 0.18
SNCA-203ENST00000394986 OLFML2AQ68BL7 652 aa16.17■□□□□ 0.18
SNCA-203ENST00000394986 FAM53AQ6NSI3 398 aaPredicted RBP16.17■□□□□ 0.18
SNCA-203ENST00000394986 ABHD12Q8N2K0 398 aa16.17■□□□□ 0.18
SNCA-203ENST00000394986 ARL11Q969Q4 196 aa16.17■□□□□ 0.18
SNCA-203ENST00000394986 HDHD3Q9BSH5 251 aaPredicted RBP16.17■□□□□ 0.18
SNCA-203ENST00000394986 LINC00574Q9H8X3 128 aa16.17■□□□□ 0.18
SNCA-203ENST00000394986 AK3Q9UIJ7 227 aa16.17■□□□□ 0.18
SNCA-203ENST00000394986 KIAA2026Q5HYC2 2103 aa16.16■□□□□ 0.18
SNCA-203ENST00000394986 C12orf77C9JDV5 145 aa16.16■□□□□ 0.18
SNCA-203ENST00000394986 CA11O75493 328 aa16.16■□□□□ 0.18
SNCA-203ENST00000394986 RAB6AP20340 208 aa16.16■□□□□ 0.18
SNCA-203ENST00000394986 RPS19P39019 145 aaKnown RBP16.16■□□□□ 0.18
SNCA-203ENST00000394986 VBP1P61758 197 aa16.16■□□□□ 0.18
SNCA-203ENST00000394986 OR52W1Q6IF63 320 aa16.16■□□□□ 0.18
SNCA-203ENST00000394986 Q6ZPA2 131 aa16.16■□□□□ 0.18
SNCA-203ENST00000394986 DYNAPQ8N1N2 210 aa16.16■□□□□ 0.18
SNCA-203ENST00000394986 PRR18Q8N4B5 295 aa16.16■□□□□ 0.18
SNCA-203ENST00000394986 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.16■□□□□ 0.18
SNCA-203ENST00000394986 OR56B1Q8NGI3 324 aa16.16■□□□□ 0.18
SNCA-203ENST00000394986 PECRQ9BY49 303 aa16.16■□□□□ 0.18
SNCA-203ENST00000394986 IGHV3-43A0A0B4J1X8 118 aa16.15■□□□□ 0.18
SNCA-203ENST00000394986 TRIM77I1YAP6 450 aa16.15■□□□□ 0.18
SNCA-203ENST00000394986 IGHV3-43DP0DP04 118 aa16.15■□□□□ 0.18
SNCA-203ENST00000394986 GZMHP20718 246 aa16.15■□□□□ 0.18
SNCA-203ENST00000394986 GPR107Q5VW38 600 aa16.15■□□□□ 0.18
SNCA-203ENST00000394986 Q6ZTK2 550 aa16.15■□□□□ 0.18
SNCA-203ENST00000394986 LDLRAD3Q86YD5 345 aa16.15■□□□□ 0.18
SNCA-203ENST00000394986 OR4P4Q8NGL7 312 aa16.15■□□□□ 0.18
SNCA-203ENST00000394986 OR5H6Q8NGV6 325 aa16.15■□□□□ 0.18
SNCA-203ENST00000394986 OR1L1Q8NH94 360 aa16.15■□□□□ 0.18
SNCA-203ENST00000394986 CD34P28906 385 aa16.14■□□□□ 0.17
SNCA-203ENST00000394986 IER3P46695 156 aa16.14■□□□□ 0.17
SNCA-203ENST00000394986 SERPINB10P48595 397 aa16.14■□□□□ 0.17
SNCA-203ENST00000394986 PLA1AQ53H76 456 aa16.14■□□□□ 0.17
SNCA-203ENST00000394986 ATG5Q9H1Y0 275 aa16.14■□□□□ 0.17
SNCA-203ENST00000394986 CHMP1AQ9HD42 196 aaPredicted RBP16.14■□□□□ 0.17
SNCA-203ENST00000394986 MBNL3Q9NUK0 354 aaKnown RBP16.14■□□□□ 0.17
SNCA-203ENST00000394986 HSF4Q9ULV5 492 aa16.14■□□□□ 0.17
SNCA-203ENST00000394986 TBL2Q9Y4P3 447 aaKnown RBP16.14■□□□□ 0.17
SNCA-203ENST00000394986 A0A075B6Q4 140 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 A0A087X0M5 115 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 A0A1B0GX30 115 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 RAB27BO00194 218 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 ORC5O43913 435 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 NAPSAO96009 420 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 HBZP02008 142 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 GNG10P50151 68 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 C6orf183Q5T699 404 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 GPR141Q7Z602 305 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms