RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 NTNG2Q96CW9 530 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 FOXB1Q99853 325 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 CLEC18AA5D8T8 446 aa11.43□□□□□ -0.58
NFKB1-202ENST00000394820 SEC11BP0C7V7 166 aa11.43□□□□□ -0.58
NFKB1-202ENST00000394820 CD33P20138 364 aa11.43□□□□□ -0.58
NFKB1-202ENST00000394820 BCL3P20749 454 aa11.43□□□□□ -0.58
NFKB1-202ENST00000394820 TPRX1Q8N7U7 411 aa11.43□□□□□ -0.58
NFKB1-202ENST00000394820 CLEC18CQ8NCF0 446 aa11.43□□□□□ -0.58
NFKB1-202ENST00000394820 OR2M3Q8NG83 312 aa11.43□□□□□ -0.58
NFKB1-202ENST00000394820 RHBDD1Q8TEB9 315 aa11.43□□□□□ -0.58
NFKB1-202ENST00000394820 A0A1B0GTQ1 180 aa11.43□□□□□ -0.58
NFKB1-202ENST00000394820 PDCD6O75340 191 aa11.43□□□□□ -0.58
NFKB1-202ENST00000394820 PSG2P11465 335 aa11.43□□□□□ -0.58
NFKB1-202ENST00000394820 KHDC3LQ587J8 217 aa11.43□□□□□ -0.58
NFKB1-202ENST00000394820 TMPRSS7Q7RTY8 843 aa11.43□□□□□ -0.58
NFKB1-202ENST00000394820 SAP25Q8TEE9 199 aa11.43□□□□□ -0.58
NFKB1-202ENST00000394820 COLQQ9Y215 455 aaPredicted RBP11.43□□□□□ -0.58
NFKB1-202ENST00000394820 A0A0J9YW62 118 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 MAP1LC3B2A6NCE7 125 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 CRYM-AS1A6NIL9 109 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 EDDM3BP56851 147 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 HES3Q5TGS1 186 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 BTNL3Q6UXE8 466 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 OR6X1Q8NH79 312 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 GNPNAT1Q96EK6 184 aaPredicted RBP11.42□□□□□ -0.58
NFKB1-202ENST00000394820 MAP1LC3BQ9GZQ8 125 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 FZR1Q9UM11 496 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 LRP4O75096 1905 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 ANKRD30BLA7E2S9 258 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 LDLRAD4O15165 306 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 NXPH2O95156 264 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 MELTFP08582 738 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 CA6P23280 308 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 GABRA2P47869 451 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 OR10V1Q8NGI7 309 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 PTX4Q96A99 478 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 CHST5Q9GZS9 411 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 ARV1Q9H2C2 271 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 B3GAT1Q9P2W7 334 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 IL17BQ9UHF5 180 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 TMED3Q9Y3Q3 217 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 DEGS1O15121 323 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 SLC35B1P78383 322 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 CALHM1Q8IU99 346 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 LYZL4Q96KX0 146 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 OBP2BQ9NPH6 170 aa11.42□□□□□ -0.58
NFKB1-202ENST00000394820 LOC102725191A0A1B0GVB3 256 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 ZIC3O60481 467 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 FOLR3P41439 243 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 ERVFRD-1P60508 538 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 SPEM2Q0P670 501 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 RTL6Q6ICC9 239 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 PCED1AQ9H1Q7 454 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 SEC14L6B5MCN3 397 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 ZNF737O75373 536 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 SYNGR4O95473 234 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 OPN1MWP04001 364 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 OPN1MW2P0DN77 364 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 OPN1MW3P0DN78 364 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 PSMB3P49720 205 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 VHLLQ6RSH7 139 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 BAGE3Q86Y29 109 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 BAGE2Q86Y30 109 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 PCGF1Q9BSM1 259 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 TMEM131Q92545 1883 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 H0Y8G0 127 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 RAC2P15153 192 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 NDUFB7P17568 137 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 HBG1P69891 147 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 HBG2P69892 147 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 FAM78BQ5VT40 261 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 GPR87Q9BY21 358 aa11.41□□□□□ -0.58
NFKB1-202ENST00000394820 METTL1Q9UBP6 276 aaKnown RBP11.41□□□□□ -0.58
NFKB1-202ENST00000394820 ZNF107Q9UII5 783 aaPredicted RBP11.41□□□□□ -0.58
NFKB1-202ENST00000394820 PMS2P1A4D2B8 440 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 PROB1E7EW31 1015 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 NTF3P20783 257 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 IL13RA2Q14627 380 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 TMEM187Q14656 261 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 DMBX1Q8NFW5 382 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 CHRNA10Q9GZZ6 450 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 LIME1Q9H400 295 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 RPRMQ9NS64 109 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 TIMM10BQ9Y5J6 103 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 ARFGEF3Q5TH69 2177 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 TCAPO15273 167 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 CD5P06127 495 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 ARG2P78540 354 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 ALKBH6Q3KRA9 238 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 ZNF818PQ6ZRF7 136 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 TGIF2LXQ8IUE1 241 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 CBLN4Q9NTU7 201 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 HS3ST3B1Q9Y662 390 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 GALR1P47211 349 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 PDLIM3Q53GG5 364 aaPredicted RBP11.4□□□□□ -0.58
NFKB1-202ENST00000394820 TOMM20LQ6UXN7 152 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 CNEP1R1Q8N9A8 125 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 RPH3ALQ9UNE2 315 aa11.4□□□□□ -0.58
NFKB1-202ENST00000394820 HDGFL3Q9Y3E1 203 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms