RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 GINS3Q9BRX5 216 aa14.4□□□□□ -0.1
SIPA1-201ENST00000394224 SCRT1Q9BWW7 348 aa14.4□□□□□ -0.1
SIPA1-201ENST00000394224 OR1A1Q9P1Q5 309 aa14.4□□□□□ -0.1
SIPA1-201ENST00000394224 RIF1Q5UIP0 2472 aaKnown RBP14.39□□□□□ -0.11
SIPA1-201ENST00000394224 A0A1B0GUS0 222 aa14.39□□□□□ -0.11
SIPA1-201ENST00000394224 KRASP01116 189 aa14.39□□□□□ -0.11
SIPA1-201ENST00000394224 NDUFB7P17568 137 aa14.39□□□□□ -0.11
SIPA1-201ENST00000394224 SPSB3Q6PJ21 355 aa14.39□□□□□ -0.11
SIPA1-201ENST00000394224 TVP23CQ96ET8 276 aa14.39□□□□□ -0.11
SIPA1-201ENST00000394224 TCEAL7Q9BRU2 100 aa14.39□□□□□ -0.11
SIPA1-201ENST00000394224 RNF122Q9H9V4 155 aa14.39□□□□□ -0.11
SIPA1-201ENST00000394224 ZIC3O60481 467 aa14.39□□□□□ -0.11
SIPA1-201ENST00000394224 SRP19P09132 144 aaKnown RBP14.39□□□□□ -0.11
SIPA1-201ENST00000394224 CEBPDP49716 269 aaPredicted RBP14.39□□□□□ -0.11
SIPA1-201ENST00000394224 ICAM4Q14773 271 aa14.39□□□□□ -0.11
SIPA1-201ENST00000394224 HES7Q9BYE0 225 aa14.39□□□□□ -0.11
SIPA1-201ENST00000394224 ZNF576Q9H609 170 aa14.39□□□□□ -0.11
SIPA1-201ENST00000394224 PLEKHF2Q9H8W4 249 aa14.39□□□□□ -0.11
SIPA1-201ENST00000394224 POMT1Q9Y6A1 747 aa14.39□□□□□ -0.11
SIPA1-201ENST00000394224 A0A087X0M5 115 aa14.39□□□□□ -0.11
SIPA1-201ENST00000394224 A0A1B0GX30 115 aa14.39□□□□□ -0.11
SIPA1-201ENST00000394224 PPIHO43447 177 aaKnown RBP14.39□□□□□ -0.11
SIPA1-201ENST00000394224 TPRX1Q8N7U7 411 aa14.39□□□□□ -0.11
SIPA1-201ENST00000394224 CPEB3Q8NE35 698 aaKnown RBP14.39□□□□□ -0.11
SIPA1-201ENST00000394224 ELOVL1Q9BW60 279 aa14.39□□□□□ -0.11
SIPA1-201ENST00000394224 GPR27Q9NS67 375 aa14.39□□□□□ -0.11
SIPA1-201ENST00000394224 APLNRP35414 380 aa14.38□□□□□ -0.11
SIPA1-201ENST00000394224 ARL6IP1Q15041 203 aa14.38□□□□□ -0.11
SIPA1-201ENST00000394224 SSX7Q7RTT5 188 aa14.38□□□□□ -0.11
SIPA1-201ENST00000394224 BATFQ16520 125 aa14.38□□□□□ -0.11
SIPA1-201ENST00000394224 Q6ZRM9 215 aa14.38□□□□□ -0.11
SIPA1-201ENST00000394224 MRPL21Q7Z2W9 205 aaKnown RBP14.38□□□□□ -0.11
SIPA1-201ENST00000394224 ZNF100Q8IYN0 542 aa14.38□□□□□ -0.11
SIPA1-201ENST00000394224 OR10D3Q8NH80 312 aa14.38□□□□□ -0.11
SIPA1-201ENST00000394224 ABHD5Q8WTS1 349 aa14.38□□□□□ -0.11
SIPA1-201ENST00000394224 PACRGQ96M98 296 aaPredicted RBP14.38□□□□□ -0.11
SIPA1-201ENST00000394224 CLDN1O95832 211 aa14.38□□□□□ -0.11
SIPA1-201ENST00000394224 CLDN15P56746 228 aa14.38□□□□□ -0.11
SIPA1-201ENST00000394224 C18orf12Q96KH6 178 aa14.38□□□□□ -0.11
SIPA1-201ENST00000394224 SEBOXQ9HB31 216 aaPredicted RBP14.38□□□□□ -0.11
SIPA1-201ENST00000394224 TMEM131Q92545 1883 aa14.37□□□□□ -0.11
SIPA1-201ENST00000394224 CEACAM18A8MTB9 384 aa14.37□□□□□ -0.11
SIPA1-201ENST00000394224 TRDCB7Z8K6 153 aa14.37□□□□□ -0.11
SIPA1-201ENST00000394224 CRYAAP02489 173 aa14.37□□□□□ -0.11
SIPA1-201ENST00000394224 CELA3AP09093 270 aa14.37□□□□□ -0.11
SIPA1-201ENST00000394224 CHRNA7P36544 502 aa14.37□□□□□ -0.11
SIPA1-201ENST00000394224 ZNF816Q0VGE8 651 aaPredicted RBP14.37□□□□□ -0.11
SIPA1-201ENST00000394224 IFI44Q8TCB0 444 aa14.37□□□□□ -0.11
SIPA1-201ENST00000394224 TMEM222Q9H0R3 208 aa14.37□□□□□ -0.11
SIPA1-201ENST00000394224 ZNF552Q9H707 407 aaPredicted RBP14.37□□□□□ -0.11
SIPA1-201ENST00000394224 V9GYS6 101 aa14.37□□□□□ -0.11
SIPA1-201ENST00000394224 CDX1P47902 265 aaPredicted RBP14.37□□□□□ -0.11
SIPA1-201ENST00000394224 SSR4P51571 173 aa14.37□□□□□ -0.11
SIPA1-201ENST00000394224 SELENOHQ8IZQ5 122 aaKnown RBP14.37□□□□□ -0.11
SIPA1-201ENST00000394224 MSL2Q9HCI7 577 aa14.37□□□□□ -0.11
SIPA1-201ENST00000394224 FBLN5Q9UBX5 448 aa14.37□□□□□ -0.11
SIPA1-201ENST00000394224 PGPEP1LA6NFU8 196 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 DEFB108AA8MXU0 73 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 RBM11P57052 281 aaKnown RBP14.36□□□□□ -0.11
SIPA1-201ENST00000394224 FAM3BP58499 235 aaPredicted RBP14.36□□□□□ -0.11
SIPA1-201ENST00000394224 HLA-DRB3P79483 266 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 IL13RA2Q14627 380 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 ZNF385CQ66K41 422 aaPredicted RBP14.36□□□□□ -0.11
SIPA1-201ENST00000394224 MCEMP1Q8IX19 187 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 RHBDD1Q8TEB9 315 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 MOB3AQ96BX8 217 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 TM2D1Q9BX74 207 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 TMED3Q9Y3Q3 217 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 ADGRG4Q8IZF6 3080 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 SMCO3A2RU48 225 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 SLC22A20A6NK97 555 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 RHBDL1O75783 438 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 HOXA5P20719 270 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 HERPUD1Q15011 391 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 LINC00696Q6ZRV3 163 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 RFESDQ8TAC1 157 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 PSMF1Q92530 271 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 SMIM7Q9BQ49 75 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 RBKSQ9H477 322 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 FOXD3Q9UJU5 478 aaPredicted RBP14.36□□□□□ -0.11
SIPA1-201ENST00000394224 FOXI3A8MTJ6 420 aaPredicted RBP14.36□□□□□ -0.11
SIPA1-201ENST00000394224 CA6P23280 308 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 MSX1P28360 303 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 LSM6P62312 80 aaKnown RBP14.36□□□□□ -0.11
SIPA1-201ENST00000394224 PRDX4Q13162 271 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 BTNL3Q6UXE8 466 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 HIST1H2AAQ96QV6 131 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 C19orf25Q9UFG5 118 aaPredicted RBP14.36□□□□□ -0.11
SIPA1-201ENST00000394224 STRAPQ9Y3F4 350 aaKnown RBP14.36□□□□□ -0.11
SIPA1-201ENST00000394224 MED12LQ86YW9 2145 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 MED13Q9UHV7 2174 aa14.36□□□□□ -0.11
SIPA1-201ENST00000394224 A0A0U1RQV5 110 aa14.35□□□□□ -0.11
SIPA1-201ENST00000394224 TRAPPC2LH3BP13 241 aa14.35□□□□□ -0.11
SIPA1-201ENST00000394224 P04436 131 aa14.35□□□□□ -0.11
SIPA1-201ENST00000394224 ARL16Q0P5N6 197 aa14.35□□□□□ -0.11
SIPA1-201ENST00000394224 CST9LP1Q5W188 147 aa14.35□□□□□ -0.11
SIPA1-201ENST00000394224 SLC25A31Q9H0C2 315 aa14.35□□□□□ -0.11
SIPA1-201ENST00000394224 OPA3Q9H6K4 179 aa14.35□□□□□ -0.11
SIPA1-201ENST00000394224 CD300LBA8K4G0 201 aa14.35□□□□□ -0.11
SIPA1-201ENST00000394224 CCL1P22362 96 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms