RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 GPR148Q8TDV2 347 aa13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 PYDC1Q8WXC3 89 aa13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 EAF1Q96JC9 268 aaPredicted RBP13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 PAK1IP1Q9NWT1 392 aaPredicted RBP13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 ZNF580Q9UK33 172 aa13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 ST3GAL6Q9Y274 331 aa13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 GMPPBQ9Y5P6 360 aa13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 TMEM30CPA0ZSE6 113 aa13.76□□□□□ -0.21
SNRPA1-202ENST00000394082 C15orf65H3BRN8 121 aa13.76□□□□□ -0.21
SNRPA1-202ENST00000394082 ORC5O43913 435 aa13.76□□□□□ -0.21
SNRPA1-202ENST00000394082 ZNF780AO75290 641 aaPredicted RBP13.76□□□□□ -0.21
SNRPA1-202ENST00000394082 CD1BP29016 333 aa13.76□□□□□ -0.21
SNRPA1-202ENST00000394082 CDX1P47902 265 aaPredicted RBP13.76□□□□□ -0.21
SNRPA1-202ENST00000394082 GNG10P50151 68 aa13.76□□□□□ -0.21
SNRPA1-202ENST00000394082 RBM11P57052 281 aaKnown RBP13.76□□□□□ -0.21
SNRPA1-202ENST00000394082 PNLIPRP3Q17RR3 467 aa13.76□□□□□ -0.21
SNRPA1-202ENST00000394082 MPV17LQ2QL34 196 aa13.76□□□□□ -0.21
SNRPA1-202ENST00000394082 ZIK1Q3SY52 487 aaPredicted RBP13.76□□□□□ -0.21
SNRPA1-202ENST00000394082 TMEM104Q8NE00 496 aa13.76□□□□□ -0.21
SNRPA1-202ENST00000394082 OR2T10Q8NGZ9 312 aa13.76□□□□□ -0.21
SNRPA1-202ENST00000394082 ST6GALNAC6Q969X2 333 aa13.76□□□□□ -0.21
SNRPA1-202ENST00000394082 METTL9Q9H1A3 318 aa13.76□□□□□ -0.21
SNRPA1-202ENST00000394082 TMEM138Q9NPI0 162 aa13.76□□□□□ -0.21
SNRPA1-202ENST00000394082 RPL36Q9Y3U8 105 aaKnown RBP13.76□□□□□ -0.21
SNRPA1-202ENST00000394082 RYR3Q15413 4870 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 H3BNX3 289 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 CCL24O00175 119 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 TXNL1O43396 289 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 HTR3BO95264 441 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 ELANEP08246 267 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 GPR12P47775 334 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 ZNF137PP52743 207 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 FOXE3Q13461 319 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 KIR2DS1Q14954 304 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 LTC4SQ16873 150 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 TMEM30BQ3MIR4 351 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 LPCAT4Q643R3 524 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 RPL22L1Q6P5R6 122 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 C18orf65Q6ZTR6 163 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 SATL1Q86VE3 508 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 CBR4Q8N4T8 237 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 Q8N9W7 124 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 OR52I1Q8NGK6 324 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 OR8U1Q8NH10 309 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 OR52N1Q8NH53 320 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 RGP1Q92546 391 aaPredicted RBP13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 FAM192AQ9GZU8 254 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 DCLRE1BQ9H816 532 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 AASSQ9UDR5 926 aa13.75□□□□□ -0.21
SNRPA1-202ENST00000394082 OR7C1O76099 320 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-202ENST00000394082 CSTBP04080 98 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-202ENST00000394082 IL3RAP26951 378 aa13.74□□□□□ -0.21
SNRPA1-202ENST00000394082 CXorf66Q5JRM2 361 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-202ENST00000394082 MOB3BQ86TA1 216 aa13.74□□□□□ -0.21
SNRPA1-202ENST00000394082 C10orf67Q8IYJ2 551 aa13.74□□□□□ -0.21
SNRPA1-202ENST00000394082 OR10K1Q8NGX5 313 aa13.74□□□□□ -0.21
SNRPA1-202ENST00000394082 RTN4IP1Q8WWV3 396 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-202ENST00000394082 TMEM106AQ96A25 262 aa13.74□□□□□ -0.21
SNRPA1-202ENST00000394082 RAX2Q96IS3 184 aa13.74□□□□□ -0.21
SNRPA1-202ENST00000394082 RAB9BQ9NP90 201 aa13.74□□□□□ -0.21
SNRPA1-202ENST00000394082 PLSCR3Q9NRY6 295 aa13.74□□□□□ -0.21
SNRPA1-202ENST00000394082 GFOD1Q9NXC2 390 aa13.74□□□□□ -0.21
SNRPA1-202ENST00000394082 TAS2R4Q9NYW5 299 aa13.74□□□□□ -0.21
SNRPA1-202ENST00000394082 LINC00527Q9UJ94 153 aa13.74□□□□□ -0.21
SNRPA1-202ENST00000394082 SIRT4Q9Y6E7 314 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-202ENST00000394082 LINC01548A6NM66 108 aa13.73□□□□□ -0.21
SNRPA1-202ENST00000394082 NCBP2LA6PVI3 153 aaKnown RBP13.73□□□□□ -0.21
SNRPA1-202ENST00000394082 RRP9O43818 475 aaKnown RBP13.73□□□□□ -0.21
SNRPA1-202ENST00000394082 CDRT1O95170 752 aa13.73□□□□□ -0.21
SNRPA1-202ENST00000394082 MOSP00540 346 aa13.73□□□□□ -0.21
SNRPA1-202ENST00000394082 LIMS3P0CW19 117 aa13.73□□□□□ -0.21
SNRPA1-202ENST00000394082 LIMS4P0CW20 117 aa13.73□□□□□ -0.21
SNRPA1-202ENST00000394082 ZNF93P35789 620 aaPredicted RBP13.73□□□□□ -0.21
SNRPA1-202ENST00000394082 PPP3R1P63098 170 aa13.73□□□□□ -0.21
SNRPA1-202ENST00000394082 GPR50Q13585 617 aa13.73□□□□□ -0.21
SNRPA1-202ENST00000394082 STEAP3Q658P3 488 aa13.73□□□□□ -0.21
SNRPA1-202ENST00000394082 ZNF497Q6ZNH5 498 aa13.73□□□□□ -0.21
SNRPA1-202ENST00000394082 OR5M8Q8NGP6 311 aa13.73□□□□□ -0.21
SNRPA1-202ENST00000394082 ARL11Q969Q4 196 aa13.73□□□□□ -0.21
SNRPA1-202ENST00000394082 CHCHD6Q9BRQ6 235 aa13.73□□□□□ -0.21
SNRPA1-202ENST00000394082 SPACA1Q9HBV2 294 aa13.73□□□□□ -0.21
SNRPA1-202ENST00000394082 AMBNQ9NP70 447 aa13.73□□□□□ -0.21
SNRPA1-202ENST00000394082 FGF20Q9NP95 211 aaPredicted RBP13.73□□□□□ -0.21
SNRPA1-202ENST00000394082 LOC100130705A0A1B0GUX0 176 aa13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 A0A1W2PPE3 182 aa13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 SDCBPO00560 298 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 GEMIN2O14893 280 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 IGHG4P01861 327 aa13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 MT-ND4P03905 459 aa13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 IGF1P05019 195 aa13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 SOX2P48431 317 aa13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 GTF2A1P52655 376 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 CFHR3Q02985 330 aa13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 GPR176Q14439 515 aa13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 C9orf66Q5T8R8 295 aa13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 SLC25A48Q6ZT89 311 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 FAM71E2Q8N5Q1 922 aa13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 MRPS24Q96EL2 167 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 S1PR3Q99500 378 aa13.72□□□□□ -0.21
SNRPA1-202ENST00000394082 S100A13Q99584 98 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms