RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 C1QBP02746 253 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 PRB1P04280 392 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 DHODHQ02127 395 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 EFNB3Q15768 340 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 MST1LQ2TV78 715 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 PHLDA2Q53GA4 152 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 CLEC18BQ6UXF7 455 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 SGPP2Q8IWX5 399 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 TPRX1Q8N7U7 411 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 ZNF565Q8N9K5 539 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 DRAXINQ8NBI3 349 aaPredicted RBP7.24□□□□□ -1.25
TDP1-203ENST00000393454 OR2T35Q8NGX2 323 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 Q8TCH9 128 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 MITD1Q8WV92 249 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 COQ2Q96H96 371 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 VRK1Q99986 396 aaPredicted RBP7.24□□□□□ -1.25
TDP1-203ENST00000393454 SHARPINQ9H0F6 387 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 TAF9BQ9HBM6 251 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 DLL4Q9NR61 685 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 DCAF16Q9NXF7 216 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 PCDHB10Q9UN67 800 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 GYPAP02724 150 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 GIPP09681 153 aaPredicted RBP7.23□□□□□ -1.25
TDP1-203ENST00000393454 AGAP20933 346 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 GLIPR1P48060 266 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 PIGPP57054 158 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 SNRPD2P62316 118 aaKnown RBP7.23□□□□□ -1.25
TDP1-203ENST00000393454 SLC38A6Q8IZM9 456 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 GAPTQ8N292 157 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 ZNRF1Q8ND25 227 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 ANGPTL6Q8NI99 470 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 MRGPRDQ8TDS7 321 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 SECTM1Q8WVN6 248 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 CCL17Q92583 94 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 SNX22Q96L94 193 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 RANBP3Q9H6Z4 567 aaPredicted RBP7.23□□□□□ -1.25
TDP1-203ENST00000393454 PRR13Q9NZ81 148 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 TRBV6-7A0A0A0MS04 114 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 MEX3AA1L020 520 aaKnown RBP7.23□□□□□ -1.25
TDP1-203ENST00000393454 OOEPA6NGQ2 149 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 CCSO14618 274 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 ZNF737O75373 536 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 DNASE1P24855 282 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 LOXP28300 417 aaPredicted RBP7.23□□□□□ -1.25
TDP1-203ENST00000393454 IL2RGP31785 369 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 UCP3P55916 312 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 EDDM3BP56851 147 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 H2BFSP57053 126 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 RAP2BP61225 183 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 SUPT4H1P63272 117 aaKnown RBP7.23□□□□□ -1.25
TDP1-203ENST00000393454 KCNJ8Q15842 424 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 C6orf183Q5T699 404 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 DCAF12L2Q5VW00 463 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 LPCAT3Q6P1A2 487 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 C1orf87Q8N0U7 546 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 COQ8AQ8NI60 647 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 FAM222BQ8WU58 562 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 WDR89Q96FK6 387 aaPredicted RBP7.23□□□□□ -1.25
TDP1-203ENST00000393454 CCL13Q99616 98 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 CABLES2Q9BTV7 478 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 PDCD10Q9BUL8 212 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 SLC5A7Q9GZV3 580 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 DNTTIP1Q9H147 329 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 MBNL3Q9NUK0 354 aaKnown RBP7.23□□□□□ -1.25
TDP1-203ENST00000393454 PIPOXQ9P0Z9 390 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 OR1A1Q9P1Q5 309 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 KCNIP3Q9Y2W7 256 aa7.23□□□□□ -1.25
TDP1-203ENST00000393454 ABCA4P78363 2273 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 RAI1Q7Z5J4 1906 aaPredicted RBP7.22□□□□□ -1.25
TDP1-203ENST00000393454 C13orf42A0A1B0GVH6 325 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 C12orf77C9JDV5 145 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 K7N7A8 449 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 HSD17B6O14756 317 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 MGST3O14880 152 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 IFNA2P01563 188 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 ERP29P30040 261 aaKnown RBP7.22□□□□□ -1.25
TDP1-203ENST00000393454 CEACAM6P40199 344 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 GZMKP49863 264 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 HMGN3Q15651 99 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 SWI5Q1ZZU3 235 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 STUMQ69YW2 141 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 ZNF561Q8N587 486 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 CCDC71LQ8N9Z2 235 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 OR13A1Q8NGR1 328 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 OR1L1Q8NH94 360 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 RTN4IP1Q8WWV3 396 aaPredicted RBP7.22□□□□□ -1.25
TDP1-203ENST00000393454 GALMQ96C23 342 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 ZNF486Q96H40 463 aaPredicted RBP7.22□□□□□ -1.25
TDP1-203ENST00000393454 HYLS1Q96M11 299 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 TMEM204Q9BSN7 226 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 DCTN5Q9BTE1 182 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 RSRP1Q9BUV0 290 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 ZNF665Q9H7R5 613 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 SEBOXQ9HB31 216 aaPredicted RBP7.22□□□□□ -1.25
TDP1-203ENST00000393454 SLC2A9Q9NRM0 540 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 TMEM106BQ9NUM4 274 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 OR2W1Q9Y3N9 320 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 RBM7Q9Y580 266 aaKnown RBP7.22□□□□□ -1.25
TDP1-203ENST00000393454 MAB21L2Q9Y586 359 aa7.22□□□□□ -1.25
TDP1-203ENST00000393454 ARFGEF3Q5TH69 2177 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms