RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 OTOGLQ3ZCN5 2332 aa0.63□□□□□ -2.31
RNU6-440P-201ENST00000390882 C17orf98A8MV24 154 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 F8VP50 259 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 BOLA2-SMG1P6H3BVE0 249 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 NDUFS8O00217 210 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 PSMD11O00231 422 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 PLPP3O14495 311 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 CDIPTO14735 213 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 FGF16O43320 207 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 DENRO43583 198 aaKnown RBP0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 SHOX2O60902 331 aaPredicted RBP0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 CST4P01036 141 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 IVLP07476 585 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 P0DMU3 169 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 FAM231AP0DMU4 169 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 FAM231CP0DMU5 169 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 AKR1C4P17516 323 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 CARD18P57730 90 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 KRTAP12-1P59990 96 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 PAFAH1B3Q15102 231 aaKnown RBP0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 BSXQ3C1V8 233 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 TCF23Q7RTU1 214 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 MRPL52Q86TS9 123 aaKnown RBP0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 LRRC6Q86X45 466 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 CDRT4Q8N9R6 151 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 GATD1Q8NB37 220 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 OR10P1Q8NGE3 313 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 OR4C16Q8NGL9 310 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 OR2AE1Q8NHA4 323 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 RNASE11Q8TAA1 199 aaKnown RBP0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 FAM45AQ8TCE6 357 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 TMEM239Q8WW34 195 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 GTF2H4Q92759 462 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 MSANTD3Q96H12 275 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 CAPZA3Q96KX2 299 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 PGLYRP3Q96LB9 341 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 CATSPER2Q96P56 530 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 TXNDC17Q9BRA2 123 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 PRRG3Q9BZD7 231 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 GOLPH3Q9H4A6 298 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 ZNF286AQ9HBT8 521 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 IFT46Q9NQC8 304 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 TAS2R13Q9NYV9 303 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 MAT2BQ9NZL9 334 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 NXT1Q9UKK6 140 aaKnown RBP0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 RBMX2Q9Y388 322 aaKnown RBP0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 HSPE1-MOB4S4R3N1 261 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 CACNA1SQ13698 1873 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 PCNX2A6NKB5 2137 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 PTPRKQ15262 1439 aa0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 FBN1P35555 2871 aaKnown RBP0.62□□□□□ -2.31
RNU6-440P-201ENST00000390882 YLPM1P49750 1951 aaKnown RBP0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 KMT2EQ8IZD2 1858 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 KIAA0232Q92628 1395 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 IGKV1-12A0A0C4DH73 117 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 C8orf87E5RJ46 101 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 LY6LH3BQJ8 138 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 TOR1AO14656 332 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 FABP7O15540 132 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 S1PR2O95136 353 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 SNAP29O95721 258 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 LDOC1O95751 146 aaPredicted RBP0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 LTAP01374 205 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 IGKV1D-12P01611 117 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 CPMP14384 443 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 ATF1P18846 271 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 BLVRBP30043 206 aaPredicted RBP0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 GABRA3P34903 492 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 MP68P56378 58 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 RAB2AP61019 212 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 UBE2KP61086 200 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 TSPAN31Q12999 210 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 SKP2Q13309 424 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 OR8G1Q15617 311 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 PSG3Q16557 428 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 PCOTHQ58A44 107 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 SDIM1Q6ZPB5 146 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 Q6ZRU5 148 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 FAM19A3Q7Z5A8 133 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 MUC15Q8N387 334 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 TRIML2Q8N7C3 387 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 OR5P2Q8WZ92 322 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 GALMQ96C23 342 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 CCDC124Q96CT7 223 aaKnown RBP0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 DNAJC30Q96LL9 226 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 PRSS27Q9BQR3 290 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 FAAP24Q9BTP7 215 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 POTEKPQ9BYX7 375 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 AICDAQ9GZX7 198 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 CXCL16Q9H2A7 254 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 HAUS4Q9H6D7 363 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 CCL26Q9Y258 94 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 STK38LQ9Y2H1 464 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 MTCH2Q9Y6C9 303 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 LCTP09848 1927 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 ABCB11O95342 1321 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 PTPRJQ12913 1337 aa0.61□□□□□ -2.31
RNU6-440P-201ENST00000390882 ADAMTSL1Q8N6G6 1762 aa0.6□□□□□ -2.31
RNU6-440P-201ENST00000390882 KDM5BQ9UGL1 1544 aa0.6□□□□□ -2.31
RNU6-440P-201ENST00000390882 LOC100506127A0A0U1RQW1 187 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms