RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 SSMEM1Q8WWF3 244 aa12.24□□□□□ -0.45
IGHV3-53-201ENST00000390627 KIRREL1Q96J84 757 aa12.24□□□□□ -0.45
IGHV3-53-201ENST00000390627 RNF167Q9H6Y7 350 aa12.24□□□□□ -0.45
IGHV3-53-201ENST00000390627 LINC00574Q9H8X3 128 aa12.24□□□□□ -0.45
IGHV3-53-201ENST00000390627 PLEKHJ1Q9NW61 149 aa12.24□□□□□ -0.45
IGHV3-53-201ENST00000390627 IDI2-AS1Q9NZ38 188 aa12.24□□□□□ -0.45
IGHV3-53-201ENST00000390627 ZNRD1Q9P1U0 126 aa12.24□□□□□ -0.45
IGHV3-53-201ENST00000390627 POMT1Q9Y6A1 747 aa12.24□□□□□ -0.45
IGHV3-53-201ENST00000390627 A0A0A6YYD4 124 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 NPIPB11E5RHQ5 1161 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 ORC5O43913 435 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 CD34P28906 385 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 SSTR5P35346 364 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 MXD1Q05195 221 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 SLC9A3R2Q15599 337 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 C6orf183Q5T699 404 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 MINOS1Q5TGZ0 78 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 C6orf201Q7Z4U5 140 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 ABHD12Q8N2K0 398 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 OR13F1Q8NGS4 319 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 ZNF596Q8TC21 504 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 FAM216AQ8WUB2 273 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 CCDC107Q8WV48 283 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 DUX5Q96PT3 197 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 SULT4A1Q9BR01 284 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 DPAGT1Q9H3H5 408 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 DAPK2Q9UIK4 370 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 MINOS1-NBL1R4GNA1 71 aa12.23□□□□□ -0.45
IGHV3-53-201ENST00000390627 A0A087X0M5 115 aa12.22□□□□□ -0.45
IGHV3-53-201ENST00000390627 TRAV39A0A0B4J263 110 aa12.22□□□□□ -0.45
IGHV3-53-201ENST00000390627 A0A1B0GX30 115 aa12.22□□□□□ -0.45
IGHV3-53-201ENST00000390627 BTBD17A6NE02 478 aa12.22□□□□□ -0.45
IGHV3-53-201ENST00000390627 SOCS1O15524 211 aa12.22□□□□□ -0.45
IGHV3-53-201ENST00000390627 RNASE1P07998 156 aaKnown RBP12.22□□□□□ -0.45
IGHV3-53-201ENST00000390627 SLC2A2P11168 524 aaPredicted RBP12.22□□□□□ -0.45
IGHV3-53-201ENST00000390627 NFYBP25208 207 aa12.22□□□□□ -0.45
IGHV3-53-201ENST00000390627 GDNFP39905 211 aa12.22□□□□□ -0.45
IGHV3-53-201ENST00000390627 VEGFCP49767 419 aa12.22□□□□□ -0.45
IGHV3-53-201ENST00000390627 BEND2Q8NDZ0 799 aa12.22□□□□□ -0.45
IGHV3-53-201ENST00000390627 OR4K15Q8NH41 348 aa12.22□□□□□ -0.45
IGHV3-53-201ENST00000390627 DYRK2Q92630 601 aa12.22□□□□□ -0.45
IGHV3-53-201ENST00000390627 ARL11Q969Q4 196 aa12.22□□□□□ -0.45
IGHV3-53-201ENST00000390627 PTX4Q96A99 478 aa12.22□□□□□ -0.45
IGHV3-53-201ENST00000390627 FAAP24Q9BTP7 215 aa12.22□□□□□ -0.45
IGHV3-53-201ENST00000390627 FUNDC2Q9BWH2 189 aa12.22□□□□□ -0.45
IGHV3-53-201ENST00000390627 HSF4Q9ULV5 492 aa12.22□□□□□ -0.45
IGHV3-53-201ENST00000390627 A0A0B4J203 849 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 FAM172BPA6NC97 362 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 METTL21EPA6NDL7 271 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 TOR1AO14656 332 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 SPINT2O43291 252 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 TMEM127O75204 238 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 IER3P46695 156 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 LTC4SQ16873 150 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 TMEM30BQ3MIR4 351 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 BAIAP2L2Q6UXY1 529 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 Q6ZTK2 550 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 ZNF554Q86TJ5 538 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 RFESDQ8TAC1 157 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 NDNFQ8TB73 568 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 CREB3L1Q96BA8 519 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 MALSU1Q96EH3 234 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 C19orf24Q9BVV8 132 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 MEGF9Q9H1U4 602 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 RIMS4Q9H426 269 aaPredicted RBP12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 ZNF286AQ9HBT8 521 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 MBNL3Q9NUK0 354 aaKnown RBP12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 KCNIP1Q9NZI2 227 aa12.21□□□□□ -0.45
IGHV3-53-201ENST00000390627 FOXI3A8MTJ6 420 aaPredicted RBP12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 C15orf65H3BRN8 121 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 CLEC2LP0C7M8 214 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 HTR1DP28221 377 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 EFNB2P52799 333 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 PRRX1P54821 245 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 SCAND1P57086 179 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 LSM3P62310 102 aaKnown RBP12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 ACTG1P63261 375 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 PLA2G7Q13093 441 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 AANATQ16613 207 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 SLC16A12Q6ZSM3 486 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 MOB1BQ7L9L4 216 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 LHFPL4Q7Z7J7 247 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 CROCCP3Q8IVE0 287 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 OR52M1Q8NGK5 317 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 OR5R1Q8NH85 324 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 OR9G1Q8NH87 305 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 MRPL30Q8TCC3 161 aaKnown RBP12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 C17orf50Q8WW18 174 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 RAB3CQ96E17 227 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 AJUBAQ96IF1 538 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 ARHGAP5-AS1Q96IT6 56 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 MDFIQ99750 246 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 CHMP1AQ9HD42 196 aaPredicted RBP12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 TNFRSF19Q9NS68 423 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 ATRQ13535 2644 aa12.2□□□□□ -0.46
IGHV3-53-201ENST00000390627 C12orf77C9JDV5 145 aa12.19□□□□□ -0.46
IGHV3-53-201ENST00000390627 F2RL2O00254 374 aa12.19□□□□□ -0.46
IGHV3-53-201ENST00000390627 SDCBPO00560 298 aaPredicted RBP12.19□□□□□ -0.46
IGHV3-53-201ENST00000390627 SCGNO76038 276 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms