RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 C11orf94C9JXX5 98 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 FCN1O00602 326 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 HOXA5P20719 270 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 RAC1P63000 192 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 GNG3P63215 75 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 SLC10A1Q14973 349 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 SSX7Q7RTT5 188 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 RHBDD1Q8TEB9 315 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 GALMQ96C23 342 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 C10orf35Q96D05 121 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 R4GN57 208 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 A0A0U1RQV5 110 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 DEFB108AA8MXU0 73 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 NDUFS6O75380 124 aaKnown RBP11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 IGKV3-11P04433 115 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 GPR12P47775 334 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 TBC1D28Q2M2D7 210 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 SLC25A47Q6Q0C1 308 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 OR10D3Q8NH80 312 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 FLVCR1-AS1Q8TAF5 88 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 DAZAP1Q96EP5 407 aaKnown RBP11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 TP53RKQ96S44 253 aa11.42□□□□□ -0.58
TRAPPC9-201ENST00000389328 FHL1Q13642 323 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 DPPA3Q6W0C5 159 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 BSCL2Q96G97 398 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 NUDT16L1Q9BRJ7 211 aaKnown RBP11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 KCNIP2Q9NS61 270 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 SLC35D1Q9NTN3 355 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 CLCF1Q9UBD9 225 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 WNT16Q9UBV4 365 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 NAT8BQ9UHF3 227 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 IGHV1OR15-9A0A0B4J2B8 117 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 GLIPR1P48060 266 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 FAM3BP58499 235 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 HLA-BQ31612 363 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 Q8WTZ3 238 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 Q96M66 194 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 TRAF3IP2O43734 574 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 CD5P06127 495 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 CCKARP32238 428 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 RBM11P57052 281 aaKnown RBP11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 CD81P60033 236 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 D2HGDHQ8N465 521 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 KCNE4Q8WWG9 221 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 MOB3AQ96BX8 217 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 ZNF488Q96MN9 340 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 GINS3Q9BRX5 216 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 B3GAT1Q9P2W7 334 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 IGSF23A1L1A6 192 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 FAM157CP0CG43 387 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 HNRNPA3P51991 378 aaKnown RBP11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 PLAURQ03405 335 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 VAMP3Q15836 100 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 DCAF12Q5T6F0 453 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 REC114Q7Z4M0 266 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 TGIF2LXQ8IUE1 241 aa11.41□□□□□ -0.58
TRAPPC9-201ENST00000389328 CCL3P10147 92 aa11.4□□□□□ -0.58
TRAPPC9-201ENST00000389328 TMEM183BQ1AE95 376 aa11.4□□□□□ -0.58
TRAPPC9-201ENST00000389328 HIKESHIQ53FT3 197 aa11.4□□□□□ -0.58
TRAPPC9-201ENST00000389328 OR1P1Q8NH06 330 aa11.4□□□□□ -0.58
TRAPPC9-201ENST00000389328 BOD1Q96IK1 185 aa11.4□□□□□ -0.58
TRAPPC9-201ENST00000389328 LYRM2Q9NU23 88 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-201ENST00000389328 NGFP01138 241 aa11.4□□□□□ -0.58
TRAPPC9-201ENST00000389328 APOA2P02652 100 aa11.4□□□□□ -0.58
TRAPPC9-201ENST00000389328 TBX15Q96SF7 602 aa11.4□□□□□ -0.58
TRAPPC9-201ENST00000389328 OR2D2Q9H210 308 aa11.4□□□□□ -0.58
TRAPPC9-201ENST00000389328 TUBD1Q9UJT1 453 aa11.4□□□□□ -0.58
TRAPPC9-201ENST00000389328 A0A0A6YYD4 124 aa11.4□□□□□ -0.59
TRAPPC9-201ENST00000389328 CRISP2P16562 243 aa11.4□□□□□ -0.59
TRAPPC9-201ENST00000389328 ARR3P36575 388 aa11.4□□□□□ -0.59
TRAPPC9-201ENST00000389328 SUCLG1P53597 346 aaKnown RBP11.4□□□□□ -0.59
TRAPPC9-201ENST00000389328 FOXO1Q12778 655 aa11.4□□□□□ -0.59
TRAPPC9-201ENST00000389328 EIF3IQ13347 325 aaKnown RBP11.4□□□□□ -0.59
TRAPPC9-201ENST00000389328 TMEM147Q9BVK8 224 aa11.4□□□□□ -0.59
TRAPPC9-201ENST00000389328 IGHV3-43A0A0B4J1X8 118 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 RPL36A-HNRNPH2H7BZ11 118 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 GYPAP02724 150 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 IGHV3-43DP0DP04 118 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 RANP62826 216 aaKnown RBP11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 SUPT4H1P63272 117 aaKnown RBP11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 FAM166AQ6J272 317 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 PRR27Q6MZM9 219 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 SPNS3Q6ZMD2 512 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 RNF144BQ7Z419 303 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 TUBA4BQ9H853 241 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 MDC1Q14676 2089 aaKnown RBP11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 LAMTOR5O43504 91 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 IGHV3-13P01766 116 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 IGHV3-7P01780 117 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 IRF2P14316 349 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 F2RP25116 425 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 AMTP48728 403 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 RAC3P60763 192 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 OR8B8Q15620 311 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 NOL4LQ96MY1 436 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 TMEM9BQ9NQ34 198 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 CBLN4Q9NTU7 201 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 OR2W1Q9Y3N9 320 aa11.39□□□□□ -0.59
TRAPPC9-201ENST00000389328 PLXNA3P51805 1871 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms