RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 DNAJC4Q9NNZ3 241 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 SLC7A10Q9NS82 523 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 NCOA6Q14686 2063 aaPredicted RBP12.89□□□□□ -0.35
CTNS-202ENST00000381870 IGKV3D-11A0A0A0MRZ8 115 aa12.88□□□□□ -0.35
CTNS-202ENST00000381870 MDH2P40926 338 aaKnown RBP12.88□□□□□ -0.35
CTNS-202ENST00000381870 HIST1H3AP68431 136 aa12.88□□□□□ -0.35
CTNS-202ENST00000381870 ENDOGQ14249 297 aaKnown RBP12.88□□□□□ -0.35
CTNS-202ENST00000381870 TESK1Q15569 626 aa12.88□□□□□ -0.35
CTNS-202ENST00000381870 MRPL52Q86TS9 123 aaKnown RBP12.88□□□□□ -0.35
CTNS-202ENST00000381870 OR5T1Q8NG75 326 aa12.88□□□□□ -0.35
CTNS-202ENST00000381870 SCGB1C1Q8TD33 95 aa12.88□□□□□ -0.35
CTNS-202ENST00000381870 PARLQ9H300 379 aa12.88□□□□□ -0.35
CTNS-202ENST00000381870 PAM16Q9Y3D7 125 aa12.88□□□□□ -0.35
CTNS-202ENST00000381870 KIR2DS5A0A0G2JLQ3 304 aa12.88□□□□□ -0.35
CTNS-202ENST00000381870 A0A0G2JNG1 304 aa12.88□□□□□ -0.35
CTNS-202ENST00000381870 A0A1W2PNV4 684 aa12.88□□□□□ -0.35
CTNS-202ENST00000381870 KIR2DS3K7RE56 304 aa12.88□□□□□ -0.35
CTNS-202ENST00000381870 HMGB3O15347 200 aaKnown RBP12.88□□□□□ -0.35
CTNS-202ENST00000381870 MEF2BQ02080 365 aaPredicted RBP12.88□□□□□ -0.35
CTNS-202ENST00000381870 DLX2Q07687 328 aaPredicted RBP12.88□□□□□ -0.35
CTNS-202ENST00000381870 KIR2DS5Q14953 304 aa12.88□□□□□ -0.35
CTNS-202ENST00000381870 ALKBH2Q6NS38 261 aa12.88□□□□□ -0.35
CTNS-202ENST00000381870 GAPTQ8N292 157 aa12.88□□□□□ -0.35
CTNS-202ENST00000381870 PLK3Q9H4B4 646 aa12.88□□□□□ -0.35
CTNS-202ENST00000381870 A0A0G2JRQ6 117 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 CLEC18AA5D8T8 446 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 ANKUB1A6NFN9 424 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 B4DGG1 531 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 TRAF3IP2O43734 574 aaPredicted RBP12.87□□□□□ -0.35
CTNS-202ENST00000381870 TNFSF13O75888 250 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 IFNA1P01562 189 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 TYMSP04818 313 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 VDAC1P21796 283 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 RPS18P62269 152 aaKnown RBP12.87□□□□□ -0.35
CTNS-202ENST00000381870 ARL16Q0P5N6 197 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 PTPRSQ13332 1948 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 IZUMO4Q1ZYL8 232 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 RSPO1Q2MKA7 263 aaPredicted RBP12.87□□□□□ -0.35
CTNS-202ENST00000381870 SLC22A18ASQ8N1D0 253 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 BATF2Q8N1L9 274 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 C11orf42Q8N5U0 333 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 CLEC18CQ8NCF0 446 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 OR13H1Q8NG92 308 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 RNASE8Q8TDE3 154 aaKnown RBP12.87□□□□□ -0.35
CTNS-202ENST00000381870 GATAD1Q8WUU5 269 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 ST8SIA1Q92185 356 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 C20orf144Q9BQM9 153 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 SOHLH2Q9NX45 425 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 PTRH2Q9Y3E5 179 aaKnown RBP12.87□□□□□ -0.35
CTNS-202ENST00000381870 IGKV1-12A0A0C4DH73 117 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 A0A0U1RQV5 110 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 YPEL1O60688 119 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 TNFP01375 233 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 IGKV1D-12P01611 117 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 UMODP07911 640 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 FBXW4P57775 412 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 HLA-CQ95604 372 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 YPEL2Q96QA6 119 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 PPIAL4AQ9Y536 164 aa12.87□□□□□ -0.35
CTNS-202ENST00000381870 TRANK1O15050 2925 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 A0A1W2PNR3 127 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 VSTM2BA6NLU5 285 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 IL3RAP26951 378 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 CHRNA7P36544 502 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 COTL1Q14019 142 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 NSDHLQ15738 373 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 SNAI3Q3KNW1 292 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 Q6ZWC4 215 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 OR2AE1Q8NHA4 323 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 MRPL30Q8TCC3 161 aaKnown RBP12.86□□□□□ -0.35
CTNS-202ENST00000381870 LHX4Q969G2 390 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 TRAPPC1Q9Y5R8 145 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 MED12Q93074 2177 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 TDRD6O60522 2096 aaKnown RBP12.86□□□□□ -0.35
CTNS-202ENST00000381870 C2orf16Q68DN1 1984 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 A0A1W2PQF6 199 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 GYPAP02724 150 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 POU2F2P09086 479 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 FOSL2P15408 326 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 RAB7AP51149 207 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 FOXL2P58012 376 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 RPL15P61313 204 aaKnown RBP12.86□□□□□ -0.35
CTNS-202ENST00000381870 RBX1P62877 108 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 TPTE2P1Q5T6R2 138 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 FAM78BQ5VT40 261 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 RPP25Q9BUL9 199 aaKnown RBP12.86□□□□□ -0.35
CTNS-202ENST00000381870 MANBALQ9NQG1 85 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 TMEM106BQ9NUM4 274 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 COPS7AQ9UBW8 275 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 ZFP30Q9Y2G7 519 aa12.86□□□□□ -0.35
CTNS-202ENST00000381870 ARHGAP21Q5T5U3 1957 aa12.85□□□□□ -0.35
CTNS-202ENST00000381870 IGKV1D-13A0A0B4J2D9 117 aa12.85□□□□□ -0.35
CTNS-202ENST00000381870 IGKV1-13P0DP09 117 aa12.85□□□□□ -0.35
CTNS-202ENST00000381870 TEX43Q6ZNM6 134 aa12.85□□□□□ -0.35
CTNS-202ENST00000381870 NUFIP2Q7Z417 695 aaKnown RBP12.85□□□□□ -0.35
CTNS-202ENST00000381870 ZNF441Q8N8Z8 693 aa12.85□□□□□ -0.35
CTNS-202ENST00000381870 THAP3Q8WTV1 239 aaPredicted RBP12.85□□□□□ -0.35
CTNS-202ENST00000381870 ANAPC16Q96DE5 110 aa12.85□□□□□ -0.35
CTNS-202ENST00000381870 FOXJ2Q9P0K8 574 aa12.85□□□□□ -0.35
CTNS-202ENST00000381870 ST3GAL6Q9Y274 331 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms