RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 MOB3BQ86TA1 216 aa11.2□□□□□ -0.62
SHOX-202ENST00000381575 ARL11Q969Q4 196 aa11.2□□□□□ -0.62
SHOX-202ENST00000381575 SMIM19Q96E16 107 aa11.2□□□□□ -0.62
SHOX-202ENST00000381575 ZNF184Q99676 751 aaPredicted RBP11.2□□□□□ -0.62
SHOX-202ENST00000381575 TMEM138Q9NPI0 162 aa11.2□□□□□ -0.62
SHOX-202ENST00000381575 PCDHB16Q9NRJ7 776 aa11.2□□□□□ -0.62
SHOX-202ENST00000381575 ZNF281Q9Y2X9 895 aa11.2□□□□□ -0.62
SHOX-202ENST00000381575 TMEM30CPA0ZSE6 113 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 LINC01548A6NM66 108 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 SERPINE3A8MV23 424 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 C15orf65H3BRN8 121 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 OGG1O15527 345 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 DCKP27707 260 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 KCNJ3P48549 501 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 RAB7AP51149 207 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 PAX5Q02548 391 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 RIPK1Q13546 671 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 CCDC58Q4VC31 144 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 THNSL2Q86YJ6 484 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 C10orf67Q8IYJ2 551 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 OR8H3Q8N146 312 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 LINC00482Q8N8I6 264 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 HAVCR2Q8TDQ0 301 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 GHSRQ92847 366 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 S100A13Q99584 98 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 NCOR1P1Q9H4R4 102 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 IL36GQ9NZH8 169 aa11.19□□□□□ -0.62
SHOX-202ENST00000381575 IGHV1-3A0A0C4DH29 117 aa11.18□□□□□ -0.62
SHOX-202ENST00000381575 TRBV5-5A0A0J9YX44 114 aa11.18□□□□□ -0.62
SHOX-202ENST00000381575 WI2-2373I1.2A0A1W2PRP0 233 aa11.18□□□□□ -0.62
SHOX-202ENST00000381575 CCRL2O00421 344 aa11.18□□□□□ -0.62
SHOX-202ENST00000381575 SDCBPO00560 298 aaPredicted RBP11.18□□□□□ -0.62
SHOX-202ENST00000381575 SLC31A2O15432 143 aa11.18□□□□□ -0.62
SHOX-202ENST00000381575 IGFBP3P17936 291 aaPredicted RBP11.18□□□□□ -0.62
SHOX-202ENST00000381575 MYL12AP19105 171 aa11.18□□□□□ -0.62
SHOX-202ENST00000381575 RPS11P62280 158 aaKnown RBP eCLIP11.18□□□□□ -0.62
SHOX-202ENST00000381575 RPL23AP62750 156 aaKnown RBP11.18□□□□□ -0.62
SHOX-202ENST00000381575 DOC2BQ14184 412 aa11.18□□□□□ -0.62
SHOX-202ENST00000381575 NHLRC3Q5JS37 347 aa11.18□□□□□ -0.62
SHOX-202ENST00000381575 LCNL1Q6ZST4 164 aa11.18□□□□□ -0.62
SHOX-202ENST00000381575 C8orf86Q6ZUL3 223 aa11.18□□□□□ -0.62
SHOX-202ENST00000381575 MRPL41Q8IXM3 137 aaKnown RBP11.18□□□□□ -0.62
SHOX-202ENST00000381575 MUL1Q969V5 352 aa11.18□□□□□ -0.62
SHOX-202ENST00000381575 DUX3Q96PT4 197 aa11.18□□□□□ -0.62
SHOX-202ENST00000381575 IFT22Q9H7X7 185 aa11.18□□□□□ -0.62
SHOX-202ENST00000381575 BABAM2Q9NXR7 383 aa11.18□□□□□ -0.62
SHOX-202ENST00000381575 DIMT1Q9UNQ2 313 aaKnown RBP11.18□□□□□ -0.62
SHOX-202ENST00000381575 NUDT19A8MXV4 375 aa11.17□□□□□ -0.62
SHOX-202ENST00000381575 VHLP40337 213 aa11.17□□□□□ -0.62
SHOX-202ENST00000381575 DMKNQ6E0U4 476 aaPredicted RBP11.17□□□□□ -0.62
SHOX-202ENST00000381575 ZNF497Q6ZNH5 498 aa11.17□□□□□ -0.62
SHOX-202ENST00000381575 OR2W3Q7Z3T1 314 aa11.17□□□□□ -0.62
SHOX-202ENST00000381575 SLC35E3Q7Z769 313 aa11.17□□□□□ -0.62
SHOX-202ENST00000381575 PRR18Q8N4B5 295 aa11.17□□□□□ -0.62
SHOX-202ENST00000381575 JAGN1Q8N5M9 183 aa11.17□□□□□ -0.62
SHOX-202ENST00000381575 OR10V1Q8NGI7 309 aa11.17□□□□□ -0.62
SHOX-202ENST00000381575 RCC1LQ96I51 464 aaKnown RBP11.17□□□□□ -0.62
SHOX-202ENST00000381575 EAF1Q96JC9 268 aaPredicted RBP11.17□□□□□ -0.62
SHOX-202ENST00000381575 PGLYRP3Q96LB9 341 aa11.17□□□□□ -0.62
SHOX-202ENST00000381575 OR14A2Q96R54 314 aa11.17□□□□□ -0.62
SHOX-202ENST00000381575 GFOD1Q9NXC2 390 aa11.17□□□□□ -0.62
SHOX-202ENST00000381575 MRPS28Q9Y2Q9 187 aaKnown RBP11.17□□□□□ -0.62
SHOX-202ENST00000381575 EXOSC1Q9Y3B2 195 aaKnown RBP11.17□□□□□ -0.62
SHOX-202ENST00000381575 TENM3Q9P273 2699 aa11.17□□□□□ -0.62
SHOX-202ENST00000381575 NCBP2LA6PVI3 153 aaKnown RBP11.16□□□□□ -0.62
SHOX-202ENST00000381575 ZNF736B4DX44 427 aaPredicted RBP11.16□□□□□ -0.62
SHOX-202ENST00000381575 AIPO00170 330 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 FGF16O43320 207 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 ZNF816Q0VGE8 651 aaPredicted RBP11.16□□□□□ -0.62
SHOX-202ENST00000381575 Q499Y3 187 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 C5orf24Q7Z6I8 188 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 KLHL30-AS1Q8NEE0 82 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 OR10A7Q8NGE5 316 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 OR4K15Q8NH41 348 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 CHPT1Q8WUD6 406 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 GGHQ92820 318 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 TMEM80Q96HE8 168 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 RDH12Q96NR8 316 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 BANF2Q9H503 90 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 C12orf77C9JDV5 145 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 IGHG2P01859 326 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 MT-ND4P03905 459 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 MAS1P04201 325 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 GAPDHP04406 335 aaKnown RBP11.16□□□□□ -0.62
SHOX-202ENST00000381575 GNAO1P09471 354 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 GTF2F2P13984 249 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 GZMHP20718 246 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 THBS3P49746 956 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 ST3GAL4Q11206 333 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 MPV17LQ2QL34 196 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 DEFB121Q5J5C9 76 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 C11orf87Q6NUJ2 197 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 GLIPR1L1Q6UWM5 242 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 SLC16A12Q6ZSM3 486 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 LINC00596Q86U02 117 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 STPG2Q8N412 459 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 ZNF485Q8NCK3 441 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 OR1L1Q8NH94 360 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 RTN4IP1Q8WWV3 396 aaPredicted RBP11.16□□□□□ -0.62
SHOX-202ENST00000381575 PAK1IP1Q9NWT1 392 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms