RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 GABRA6Q16445 453 aa8.42□□□□□ -1.06
SNX1-202ENST00000380285 ADAD2Q8NCV1 583 aaKnown RBP8.42□□□□□ -1.06
SNX1-202ENST00000380285 MRPL24Q96A35 216 aaKnown RBP8.42□□□□□ -1.06
SNX1-202ENST00000380285 DNAJC13O75165 2243 aa8.42□□□□□ -1.06
SNX1-202ENST00000380285 PPM1DO15297 605 aa8.42□□□□□ -1.06
SNX1-202ENST00000380285 VSIG8P0DPA2 414 aa8.42□□□□□ -1.06
SNX1-202ENST00000380285 NHLRC3Q5JS37 347 aa8.42□□□□□ -1.06
SNX1-202ENST00000380285 DHRS13Q6UX07 377 aa8.42□□□□□ -1.06
SNX1-202ENST00000380285 OR4D11Q8NGI4 311 aa8.42□□□□□ -1.06
SNX1-202ENST00000380285 RNF122Q9H9V4 155 aa8.42□□□□□ -1.06
SNX1-202ENST00000380285 TRAV38-1A0A0B4J264 116 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 PTP4A3O75365 173 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 FZD5Q13467 585 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 RHBDD2Q6NTF9 364 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 AMER3Q8N944 861 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 TM4SF19Q96DZ7 209 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 TBX15Q96SF7 602 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 TRBV5-5A0A0J9YX44 114 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 MKRN2OSH3BPM6 223 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 M0R296 226 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 B2MP61769 119 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 SCGB1D4Q6XE38 83 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 OR8G5Q8NG78 346 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 TRAV8-7A0A075B6U6 113 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 C5orf52A6NGY3 159 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 J3QT63 122 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 ACTL6AO96019 429 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 PSG6Q00889 435 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 ZNF260Q3ZCT1 412 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 SPATA46Q5T0L3 261 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 C10orf113Q5VZT2 155 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 WDR74Q6RFH5 385 aaPredicted RBP8.41□□□□□ -1.06
SNX1-202ENST00000380285 GABRG3Q99928 467 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 PAM16Q9Y3D7 125 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 HEATR5BQ9P2D3 2071 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 A0A1B0GTH9 108 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 A8MWL6 223 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 RHBDL1O75783 438 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 BGLAPP02818 100 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 MELTFP08582 738 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 DDTP30046 118 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 CLDN18P56856 261 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 CST9Q5W186 159 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 OR1P1Q8NH06 330 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 SRD5A3Q9H8P0 318 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 STRCP1A6NGW2 1772 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 NKX2-6A6NCS4 301 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 IFITM10A6NMD0 228 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 PMELP40967 661 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 MEF2BQ02080 365 aaPredicted RBP8.41□□□□□ -1.06
SNX1-202ENST00000380285 ARID2Q68CP9 1835 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 NPY1RP25929 384 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 G6PCP35575 357 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 CDX1P47902 265 aaPredicted RBP8.41□□□□□ -1.06
SNX1-202ENST00000380285 TMEM108Q6UXF1 575 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 OR4P4Q8NGL7 312 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 OR1B1Q8NGR6 318 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 LILRB1Q8NHL6 650 aaPredicted RBP8.41□□□□□ -1.06
SNX1-202ENST00000380285 VN1R17PQ8TDU5 208 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 EID2BQ96D98 161 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 WASHC3Q9Y3C0 194 aa8.41□□□□□ -1.06
SNX1-202ENST00000380285 DHRS7CA6NNS2 312 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 SPINK4O60575 86 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 PAGE4O60829 102 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 GOSR1O95249 250 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 MRPS11P82912 194 aaKnown RBP8.4□□□□□ -1.06
SNX1-202ENST00000380285 OR11G2Q8NGC1 345 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 ZNF519Q8TB69 540 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 ATOH1Q92858 354 aaPredicted RBP8.4□□□□□ -1.06
SNX1-202ENST00000380285 COL11A1P12107 1806 aaPredicted RBP8.4□□□□□ -1.06
SNX1-202ENST00000380285 A0A1W2PPC1 479 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 FAM157CP0CG43 387 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 GABRG2P18507 467 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 ACAA2P42765 397 aaKnown RBP8.4□□□□□ -1.06
SNX1-202ENST00000380285 CCL7P80098 99 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 LRRC29Q8WV35 223 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 UNC13CQ8NB66 2214 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 DAOP14920 347 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 CTGFP29279 349 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 GNB2P62879 340 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 KHDC1LQ5JSQ8 128 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 LILRA6Q6PI73 481 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 LYZL2Q7Z4W2 148 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 OR2D3Q8NGH3 330 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 SGMS2Q8NHU3 365 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 NPDC1Q9NQX5 325 aaPredicted RBP8.4□□□□□ -1.06
SNX1-202ENST00000380285 PCOLCE2Q9UKZ9 415 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 PTPRFP10586 1907 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 SPRY3O43610 288 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 PNLIPP16233 465 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 IER3P46695 156 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 ROM1Q03395 351 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 CISD1Q9NZ45 108 aaKnown RBP8.4□□□□□ -1.06
SNX1-202ENST00000380285 C1RLQ9NZP8 487 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 RALYQ9UKM9 306 aaKnown RBP8.4□□□□□ -1.06
SNX1-202ENST00000380285 KLK13Q9UKR3 277 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 ZNF236Q9UL36 1845 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 CT62P0C5K7 136 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 FABP2P12104 132 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 PSMG4Q5JS54 123 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms