RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 LINC00574Q9H8X3 128 aa18.15■□□□□ 0.5
U2AF1-202ENST00000380276 ING4Q9UNL4 249 aa18.15■□□□□ 0.5
U2AF1-202ENST00000380276 EXOGQ9Y2C4 368 aaKnown RBP18.15■□□□□ 0.5
U2AF1-202ENST00000380276 IGHV3-43A0A0B4J1X8 118 aa18.14■□□□□ 0.49
U2AF1-202ENST00000380276 SEC14L6B5MCN3 397 aa18.14■□□□□ 0.49
U2AF1-202ENST00000380276 RPSAP08865 295 aaKnown RBP18.14■□□□□ 0.49
U2AF1-202ENST00000380276 IGHV3-43DP0DP04 118 aa18.14■□□□□ 0.49
U2AF1-202ENST00000380276 IL3RAP26951 378 aa18.14■□□□□ 0.49
U2AF1-202ENST00000380276 SNRPGP62308 76 aaKnown RBP18.14■□□□□ 0.49
U2AF1-202ENST00000380276 IZUMO1Q8IYV9 350 aa18.14■□□□□ 0.49
U2AF1-202ENST00000380276 Q8N9W7 124 aa18.14■□□□□ 0.49
U2AF1-202ENST00000380276 NEK7Q8TDX7 302 aa18.14■□□□□ 0.49
U2AF1-202ENST00000380276 CCDC107Q8WV48 283 aa18.14■□□□□ 0.49
U2AF1-202ENST00000380276 ARL11Q969Q4 196 aa18.14■□□□□ 0.49
U2AF1-202ENST00000380276 TAS2R4Q9NYW5 299 aa18.14■□□□□ 0.49
U2AF1-202ENST00000380276 ZNF581Q9P0T4 197 aa18.14■□□□□ 0.49
U2AF1-202ENST00000380276 ST3GAL6Q9Y274 331 aa18.14■□□□□ 0.49
U2AF1-202ENST00000380276 TMEM30CPA0ZSE6 113 aa18.13■□□□□ 0.49
U2AF1-202ENST00000380276 E9PI62 339 aa18.13■□□□□ 0.49
U2AF1-202ENST00000380276 CDRT1O95170 752 aa18.13■□□□□ 0.49
U2AF1-202ENST00000380276 LY86O95711 162 aa18.13■□□□□ 0.49
U2AF1-202ENST00000380276 RASSF2P50749 326 aa18.13■□□□□ 0.49
U2AF1-202ENST00000380276 GBX2P52951 348 aaPredicted RBP18.13■□□□□ 0.49
U2AF1-202ENST00000380276 SYS1Q8N2H4 156 aa18.13■□□□□ 0.49
U2AF1-202ENST00000380276 EI24O14681 340 aa18.12■□□□□ 0.49
U2AF1-202ENST00000380276 CIB2O75838 187 aa18.12■□□□□ 0.49
U2AF1-202ENST00000380276 CSTBP04080 98 aaKnown RBP18.12■□□□□ 0.49
U2AF1-202ENST00000380276 GZMHP20718 246 aa18.12■□□□□ 0.49
U2AF1-202ENST00000380276 VDAC1P21796 283 aa18.12■□□□□ 0.49
U2AF1-202ENST00000380276 FOXE3Q13461 319 aa18.12■□□□□ 0.49
U2AF1-202ENST00000380276 EBI3Q14213 229 aa18.12■□□□□ 0.49
U2AF1-202ENST00000380276 KIR2DS1Q14954 304 aa18.12■□□□□ 0.49
U2AF1-202ENST00000380276 SLC25A30Q5SVS4 291 aa18.12■□□□□ 0.49
U2AF1-202ENST00000380276 ATAD3CQ5T2N8 411 aa18.12■□□□□ 0.49
U2AF1-202ENST00000380276 S100A13Q99584 98 aa18.12■□□□□ 0.49
U2AF1-202ENST00000380276 METTL9Q9H1A3 318 aa18.12■□□□□ 0.49
U2AF1-202ENST00000380276 LSM4Q9Y4Z0 139 aaKnown RBP18.12■□□□□ 0.49
U2AF1-202ENST00000380276 MOSP00540 346 aa18.11■□□□□ 0.49
U2AF1-202ENST00000380276 ELANEP08246 267 aa18.11■□□□□ 0.49
U2AF1-202ENST00000380276 SERPINA2P20848 420 aa18.11■□□□□ 0.49
U2AF1-202ENST00000380276 ZNF260Q3ZCT1 412 aa18.11■□□□□ 0.49
U2AF1-202ENST00000380276 FAM53AQ6NSI3 398 aaPredicted RBP18.11■□□□□ 0.49
U2AF1-202ENST00000380276 RTN4IP1Q8WWV3 396 aaPredicted RBP18.11■□□□□ 0.49
U2AF1-202ENST00000380276 AMBNQ9NP70 447 aa18.11■□□□□ 0.49
U2AF1-202ENST00000380276 GMPPBQ9Y5P6 360 aa18.11■□□□□ 0.49
U2AF1-202ENST00000380276 FADS2O95864 444 aaKnown RBP18.1■□□□□ 0.49
U2AF1-202ENST00000380276 ALPLP05186 524 aa18.1■□□□□ 0.49
U2AF1-202ENST00000380276 CDX1P47902 265 aaPredicted RBP18.1■□□□□ 0.49
U2AF1-202ENST00000380276 PAX5Q02548 391 aa18.1■□□□□ 0.49
U2AF1-202ENST00000380276 MRPL28Q13084 256 aaKnown RBP18.1■□□□□ 0.49
U2AF1-202ENST00000380276 NKAPLQ5M9Q1 402 aa18.1■□□□□ 0.49
U2AF1-202ENST00000380276 Q8N6K4 173 aa18.1■□□□□ 0.49
U2AF1-202ENST00000380276 OR52N1Q8NH53 320 aa18.1■□□□□ 0.49
U2AF1-202ENST00000380276 PYDC1Q8WXC3 89 aa18.1■□□□□ 0.49
U2AF1-202ENST00000380276 S1PR3Q99500 378 aa18.1■□□□□ 0.49
U2AF1-202ENST00000380276 HSPB9Q9BQS6 159 aa18.1■□□□□ 0.49
U2AF1-202ENST00000380276 JAM3Q9BX67 310 aa18.1■□□□□ 0.49
U2AF1-202ENST00000380276 ERVK13-1Q9NX77 482 aa18.1■□□□□ 0.49
U2AF1-202ENST00000380276 GFOD1Q9NXC2 390 aa18.1■□□□□ 0.49
U2AF1-202ENST00000380276 SIRT4Q9Y6E7 314 aaPredicted RBP18.1■□□□□ 0.49
U2AF1-202ENST00000380276 TENM3Q9P273 2699 aa18.09■□□□□ 0.49
U2AF1-202ENST00000380276 ZNF736B4DX44 427 aaPredicted RBP18.09■□□□□ 0.49
U2AF1-202ENST00000380276 GEMIN2O14893 280 aaKnown RBP18.09■□□□□ 0.49
U2AF1-202ENST00000380276 CD2P06729 351 aa18.09■□□□□ 0.49
U2AF1-202ENST00000380276 CD1BP29016 333 aa18.09■□□□□ 0.49
U2AF1-202ENST00000380276 RBM11P57052 281 aaKnown RBP18.09■□□□□ 0.49
U2AF1-202ENST00000380276 PPP3R1P63098 170 aa18.09■□□□□ 0.49
U2AF1-202ENST00000380276 KLHL22Q53GT1 634 aa18.09■□□□□ 0.49
U2AF1-202ENST00000380276 RBMXL1Q96E39 390 aaKnown RBP18.09■□□□□ 0.49
U2AF1-202ENST00000380276 AIPO00170 330 aa18.08■□□□□ 0.48
U2AF1-202ENST00000380276 SOX6P35712 828 aa18.08■□□□□ 0.48
U2AF1-202ENST00000380276 GTF2A1P52655 376 aaPredicted RBP18.08■□□□□ 0.48
U2AF1-202ENST00000380276 DDI2Q5TDH0 399 aa18.08■□□□□ 0.48
U2AF1-202ENST00000380276 STX19Q8N4C7 294 aa18.08■□□□□ 0.48
U2AF1-202ENST00000380276 LINC00311Q8N616 119 aa18.08■□□□□ 0.48
U2AF1-202ENST00000380276 OR52M1Q8NGK5 317 aa18.08■□□□□ 0.48
U2AF1-202ENST00000380276 C4orf3Q8WVX3 66 aa18.08■□□□□ 0.48
U2AF1-202ENST00000380276 ZNF256Q9Y2P7 627 aaPredicted RBP18.08■□□□□ 0.48
U2AF1-202ENST00000380276 C15orf65H3BRN8 121 aa18.07■□□□□ 0.48
U2AF1-202ENST00000380276 SLC31A2O15432 143 aa18.07■□□□□ 0.48
U2AF1-202ENST00000380276 MYF6P23409 242 aa18.07■□□□□ 0.48
U2AF1-202ENST00000380276 ZNF93P35789 620 aaPredicted RBP18.07■□□□□ 0.48
U2AF1-202ENST00000380276 PRR18Q8N4B5 295 aa18.07■□□□□ 0.48
U2AF1-202ENST00000380276 Q8NFD4 153 aa18.07■□□□□ 0.48
U2AF1-202ENST00000380276 OR11H1Q8NG94 326 aa18.07■□□□□ 0.48
U2AF1-202ENST00000380276 OR10V1Q8NGI7 309 aa18.07■□□□□ 0.48
U2AF1-202ENST00000380276 GPR148Q8TDV2 347 aa18.07■□□□□ 0.48
U2AF1-202ENST00000380276 GNG12Q9UBI6 72 aa18.07■□□□□ 0.48
U2AF1-202ENST00000380276 C3orf84H3BNL1 204 aa18.06■□□□□ 0.48
U2AF1-202ENST00000380276 SLC2A2P11168 524 aaPredicted RBP18.06■□□□□ 0.48
U2AF1-202ENST00000380276 ALDH3A2P51648 485 aa18.06■□□□□ 0.48
U2AF1-202ENST00000380276 F2RL1P55085 397 aa18.06■□□□□ 0.48
U2AF1-202ENST00000380276 ZNF529Q6P280 563 aa18.06■□□□□ 0.48
U2AF1-202ENST00000380276 ASCL4Q6XD76 172 aa18.06■□□□□ 0.48
U2AF1-202ENST00000380276 TMEM104Q8NE00 496 aa18.06■□□□□ 0.48
U2AF1-202ENST00000380276 OR8H1Q8NGG4 311 aa18.06■□□□□ 0.48
U2AF1-202ENST00000380276 OR52I1Q8NGK6 324 aa18.06■□□□□ 0.48
U2AF1-202ENST00000380276 RGP1Q92546 391 aaPredicted RBP18.06■□□□□ 0.48
U2AF1-202ENST00000380276 TMEM106AQ96A25 262 aa18.06■□□□□ 0.48
U2AF1-202ENST00000380276 KCTD7Q96MP8 289 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms