RNA–Protein interactions for RNA: ENST00000379698.8

SH3KBP1-202, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene SH3KBP1, Length 2,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-202ENST00000379698 ELOBQ15370 118 aa11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 C5orf24Q7Z6I8 188 aa11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 OR5A2Q8NGI9 324 aa11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 APOBEC3DQ96AK3 386 aaPredicted RBP11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 RAB40CQ96S21 281 aa11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 GPHA2Q96T91 129 aa11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 TOLLIPQ9H0E2 274 aa11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 ZMAT5Q9UDW3 170 aaKnown RBP11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 TRBV6-6A0A0A6YYG2 114 aa11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 CCDC163A0A0D9SF12 145 aa11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 IGHV3-9P01782 118 aa11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 CCNOP22674 350 aa11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 ACER2Q5QJU3 275 aa11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 NCMAPQ5T1S8 102 aa11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 HS3ST6Q96QI5 342 aa11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 HIST1H2AAQ96QV6 131 aa11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 MMP24Q9Y5R2 645 aa11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 C5orf49A4QMS7 147 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 ZNF727A8MUV8 499 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 B4DEV8 164 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 OTX2P32243 289 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 CDX1P47902 265 aaPredicted RBP11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 CYB561P49447 251 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 Q0VFX4 171 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 PCSK4Q6UW60 755 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 DEPPQ9NTK1 212 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 OR2W1Q9Y3N9 320 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 HSPB6O14558 160 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 IGHV2-70P01814 119 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 CFIP05156 583 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 SERPINE2P07093 398 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 WNT2P09544 360 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 GLIPR1P48060 266 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 SLC25A24Q6NUK1 477 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 H1FOOQ8IZA3 346 aaPredicted RBP11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 ZNF610Q8N9Z0 462 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 MRPL30Q8TCC3 161 aaKnown RBP11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 Q8WTZ3 238 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 OPA3Q9H6K4 179 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 IL36RNQ9UBH0 155 aa11.15□□□□□ -0.62
SH3KBP1-202ENST00000379698 LOC102723971A0A1B0GUV8 181 aa11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 LRP5LA4QPB2 252 aa11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 TNFSF12O43508 249 aa11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 NXPH3O95157 252 aa11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 CNOT4O95628 575 aaKnown RBP11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 ZNF674Q2M3X9 581 aa11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 OR10J5Q8NHC4 309 aa11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 PSMF1Q92530 271 aa11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 GPR146Q96CH1 333 aa11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 BOKQ9UMX3 212 aaPredicted RBP11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 TNRC6BQ9UPQ9 1833 aaKnown RBP11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 TRAV20A0A0B4J274 112 aa11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 SS18L1O75177 396 aaPredicted RBP11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 HLA-DRB3P79483 266 aa11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 ZNF324BQ6AW86 544 aaPredicted RBP11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 SLC23A3Q6PIS1 610 aa11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 THNSL2Q86YJ6 484 aa11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 OR13D1Q8NGV5 346 aa11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 GGACTQ9BVM4 153 aa11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 CRIM1Q9NZV1 1036 aa11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 RNF150Q9ULK6 438 aa11.14□□□□□ -0.63
SH3KBP1-202ENST00000379698 SLC33A1O00400 549 aaPredicted RBP11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 HLA-HP01893 362 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 SERPINA7P05543 415 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 FBP1P09467 338 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 S100A2P29034 98 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 HOXA6P31267 233 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 TCEAL6Q6IPX3 200 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 ZNF880Q6PDB4 577 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 CALHM2Q9HA72 323 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 A0A096LPE4 126 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 A0A1W2PPZ6 126 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 PINLYPA6NC86 204 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 KIAA1324LA8MWY0 1029 aaPredicted RBP11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 SYNGR1O43759 233 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 YIF1AO95070 293 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 CXCL1P09341 107 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 NDUFA6P56556 154 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 PNRC1Q12796 327 aaPredicted RBP11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 FAM209BQ5JX69 171 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 ZNF343Q6P1L6 599 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 ZNF573Q86YE8 665 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 SCGB1C1Q8TD33 95 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 LSM10Q969L4 123 aaKnown RBP11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 IER2Q9BTL4 223 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 CABLES2Q9BTV7 478 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 DOK5Q9P104 306 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 PRUNE2Q8WUY3 3088 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 PI4KAP42356 2102 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 SDK2Q58EX2 2172 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 NCKAP5O14513 1909 aa11.13□□□□□ -0.63
SH3KBP1-202ENST00000379698 A0A0G2JRQ6 117 aa11.12□□□□□ -0.63
SH3KBP1-202ENST00000379698 B4E171 279 aa11.12□□□□□ -0.63
SH3KBP1-202ENST00000379698 DEGS1O15121 323 aa11.12□□□□□ -0.63
SH3KBP1-202ENST00000379698 CCL2P13500 99 aa11.12□□□□□ -0.63
SH3KBP1-202ENST00000379698 ARR3P36575 388 aa11.12□□□□□ -0.63
SH3KBP1-202ENST00000379698 TSPAN7P41732 249 aa11.12□□□□□ -0.63
SH3KBP1-202ENST00000379698 ERVFRD-1P60508 538 aa11.12□□□□□ -0.63
SH3KBP1-202ENST00000379698 ACSF3Q4G176 576 aaPredicted RBP11.12□□□□□ -0.63
SH3KBP1-202ENST00000379698 P4HA3Q7Z4N8 544 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms