RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 ZNF488Q96MN9 340 aa9.54□□□□□ -0.88
LINC00654-201ENST00000379053 FOXJ2Q9P0K8 574 aa9.54□□□□□ -0.88
LINC00654-201ENST00000379053 PRSS50Q9UI38 385 aa9.54□□□□□ -0.88
LINC00654-201ENST00000379053 IGHV3-72A0A0B4J1Y9 119 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 SOCS1O15524 211 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 CHST1O43916 411 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 FABP4P15090 132 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 PPP1CCP36873 323 aaKnown RBP9.53□□□□□ -0.88
LINC00654-201ENST00000379053 ANGPTL6Q8NI99 470 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 SSMEM1Q8WWF3 244 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 SFXN3Q9BWM7 321 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 ZNF831Q5JPB2 1677 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 SLC6A1P30531 599 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 POLR2GP62487 172 aaKnown RBP eCLIP9.53□□□□□ -0.88
LINC00654-201ENST00000379053 COTL1Q14019 142 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 ZNF429Q86V71 674 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 TPRX1Q8N7U7 411 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 LINC01560Q8TB33 94 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 PERPQ96FX8 193 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 RAB33BQ9H082 229 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 C9orf170A2RU37 121 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 IFNL4K9M1U5 179 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 CTSDP07339 412 aaPredicted RBP9.53□□□□□ -0.88
LINC00654-201ENST00000379053 RPL7P18124 248 aaKnown RBP9.53□□□□□ -0.88
LINC00654-201ENST00000379053 GALP22466 123 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 HNRNPA3P51991 378 aaKnown RBP9.53□□□□□ -0.88
LINC00654-201ENST00000379053 TIAL1Q01085 375 aaKnown RBP eCLIP9.53□□□□□ -0.88
LINC00654-201ENST00000379053 IL13RA2Q14627 380 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 MIDNQ504T8 468 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 RNF133Q8WVZ7 376 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 AKIP1Q9NQ31 210 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 ZDHHC8Q9ULC8 765 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 WASHC3Q9Y3C0 194 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 LAMB1P07942 1786 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 SVILO95425 2214 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 MGST3O14880 152 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 ANKRD55Q3KP44 614 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 FAM78BQ5VT40 261 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 C10orf113Q5VZT2 155 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 LINC00596Q86U02 117 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 METRNQ9UJH8 293 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 TRPM6Q9BX84 2022 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 LOC101059948A0A1B0GTJ6 334 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 A0A1W2PQM1 296 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 RAB29O14966 203 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 ZNF737O75373 536 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 C1QAP02745 245 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 OR5AL1P0C617 328 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 CSF2RBP32927 897 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 CAMPP49913 170 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 NHLH1Q02575 133 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 NHLH2Q02577 135 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 MMP24Q9Y5R2 645 aa9.53□□□□□ -0.88
LINC00654-201ENST00000379053 CEP290O15078 2479 aa9.52□□□□□ -0.88
LINC00654-201ENST00000379053 G6PCP35575 357 aa9.52□□□□□ -0.88
LINC00654-201ENST00000379053 PSG5Q15238 335 aa9.52□□□□□ -0.88
LINC00654-201ENST00000379053 TEX261Q6UWH6 196 aa9.52□□□□□ -0.88
LINC00654-201ENST00000379053 FAM181AQ8N9Y4 354 aa9.52□□□□□ -0.88
LINC00654-201ENST00000379053 DPH3Q96FX2 82 aa9.52□□□□□ -0.88
LINC00654-201ENST00000379053 TRAPPC1Q9Y5R8 145 aa9.52□□□□□ -0.88
LINC00654-201ENST00000379053 U3KQ87 197 aa9.52□□□□□ -0.88
LINC00654-201ENST00000379053 TMEM229AB2RXF0 380 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 PPYP01298 95 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 PSG4Q00888 419 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 IGSF11Q5DX21 431 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 C19orf35Q6ZS72 473 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 MS4A3Q96HJ5 214 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 GUCD1Q96NT3 240 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 CHST5Q9GZS9 411 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 OR2W1Q9Y3N9 320 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 CABIN1Q9Y6J0 2220 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 SMCHD1A6NHR9 2005 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 J3QR06 171 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 NDUFA2O43678 99 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 FCARP24071 287 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 KIR3DL2P43630 455 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 FAM27BQ5VT28 67 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 UNQ5815/PRO19632Q6UWF5 114 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 EAF1Q96JC9 268 aaPredicted RBP9.52□□□□□ -0.89
LINC00654-201ENST00000379053 FRRS1LQ9P0K9 344 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 AREGP15514 252 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 OR4C5Q8NGB2 326 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 OR4P4Q8NGL7 312 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 NEUROG3Q9Y4Z2 214 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 ECM29Q5VYK3 1845 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 NAT2P11245 290 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 HLA-GP17693 338 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 LAMTOR1Q6IAA8 161 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 CENPVQ7Z7K6 275 aaPredicted RBP9.52□□□□□ -0.89
LINC00654-201ENST00000379053 TMEM116Q8NCL8 245 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 MARS2Q96GW9 593 aaKnown RBP9.52□□□□□ -0.89
LINC00654-201ENST00000379053 WSB1Q9Y6I7 421 aa9.52□□□□□ -0.89
LINC00654-201ENST00000379053 SHROOM3Q8TF72 1996 aa9.51□□□□□ -0.89
LINC00654-201ENST00000379053 IGHV3OR16-10A0A075B7F0 116 aa9.51□□□□□ -0.89
LINC00654-201ENST00000379053 RNF224P0DH78 156 aa9.51□□□□□ -0.89
LINC00654-201ENST00000379053 RPL27AP46776 148 aaKnown RBP9.51□□□□□ -0.89
LINC00654-201ENST00000379053 FGF8P55075 233 aaPredicted RBP9.51□□□□□ -0.89
LINC00654-201ENST00000379053 DCAF12L2Q5VW00 463 aa9.51□□□□□ -0.89
LINC00654-201ENST00000379053 ZBTB34Q8NCN2 500 aa9.51□□□□□ -0.89
LINC00654-201ENST00000379053 MIOXQ9UGB7 285 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms