RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 J3QLW9 94 aa13.85□□□□□ -0.19
PDLIM4-202ENST00000379018 SDCBPO00560 298 aaPredicted RBP13.85□□□□□ -0.19
PDLIM4-202ENST00000379018 SAP30O75446 220 aa13.85□□□□□ -0.19
PDLIM4-202ENST00000379018 MOSP00540 346 aa13.85□□□□□ -0.19
PDLIM4-202ENST00000379018 IGHG4P01861 327 aa13.85□□□□□ -0.19
PDLIM4-202ENST00000379018 ZNF19P17023 458 aa13.85□□□□□ -0.19
PDLIM4-202ENST00000379018 IL3RAP26951 378 aa13.85□□□□□ -0.19
PDLIM4-202ENST00000379018 SOX6P35712 828 aa13.85□□□□□ -0.19
PDLIM4-202ENST00000379018 CFHR3Q02985 330 aa13.85□□□□□ -0.19
PDLIM4-202ENST00000379018 KDM4DQ6B0I6 523 aa13.85□□□□□ -0.19
PDLIM4-202ENST00000379018 TMEM65Q6PI78 240 aa13.85□□□□□ -0.19
PDLIM4-202ENST00000379018 RNF152Q8N8N0 203 aa13.85□□□□□ -0.19
PDLIM4-202ENST00000379018 CCDC107Q8WV48 283 aa13.85□□□□□ -0.19
PDLIM4-202ENST00000379018 TNFAIP8L1Q8WVP5 186 aa13.85□□□□□ -0.19
PDLIM4-202ENST00000379018 CIB1Q99828 191 aa13.85□□□□□ -0.19
PDLIM4-202ENST00000379018 WSB1Q9Y6I7 421 aa13.85□□□□□ -0.19
PDLIM4-202ENST00000379018 SULT1B1O43704 296 aa13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 HTR3BO95264 441 aa13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 ATP6V1G2O95670 118 aa13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 SPNP16150 400 aa13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 PSMB8P28062 276 aa13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 F2RL1P55085 397 aa13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 GNB1P62873 340 aa13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 ZNF616Q08AN1 781 aa13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 RSU1Q15404 277 aa13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 ASPHD1Q5U4P2 390 aa13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 ADAMTSL5Q6ZMM2 481 aa13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 TSEN15Q8WW01 171 aaKnown RBP13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 RTN4IP1Q8WWV3 396 aaPredicted RBP13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 DCUN1D4Q92564 292 aa13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 RFKQ969G6 155 aa13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 ARL11Q969Q4 196 aa13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 DPCDQ9BVM2 203 aaPredicted RBP13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 KLK15Q9H2R5 256 aa13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 LINC00574Q9H8X3 128 aa13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 PLSCR3Q9NRY6 295 aa13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 POMPQ9Y244 141 aa13.84□□□□□ -0.19
PDLIM4-202ENST00000379018 SLC16A6O15403 523 aa13.83□□□□□ -0.2
PDLIM4-202ENST00000379018 GYG2O15488 501 aa13.83□□□□□ -0.2
PDLIM4-202ENST00000379018 INSL3P51460 131 aa13.83□□□□□ -0.2
PDLIM4-202ENST00000379018 ALKBH1Q13686 389 aaKnown RBP13.83□□□□□ -0.2
PDLIM4-202ENST00000379018 IL13RA2Q14627 380 aa13.83□□□□□ -0.2
PDLIM4-202ENST00000379018 SRSF7Q16629 238 aaKnown RBP eCLIP13.83□□□□□ -0.2
PDLIM4-202ENST00000379018 DNAL1Q4LDG9 190 aa13.83□□□□□ -0.2
PDLIM4-202ENST00000379018 SLC16A12Q6ZSM3 486 aa13.83□□□□□ -0.2
PDLIM4-202ENST00000379018 AMIGO2Q86SJ2 522 aa13.83□□□□□ -0.2
PDLIM4-202ENST00000379018 ZDHHC13Q8IUH4 622 aa13.83□□□□□ -0.2
PDLIM4-202ENST00000379018 SUMF2Q8NBJ7 301 aa13.83□□□□□ -0.2
PDLIM4-202ENST00000379018 OR10A7Q8NGE5 316 aa13.83□□□□□ -0.2
PDLIM4-202ENST00000379018 OR8J1Q8NGP2 316 aa13.83□□□□□ -0.2
PDLIM4-202ENST00000379018 NEK7Q8TDX7 302 aa13.83□□□□□ -0.2
PDLIM4-202ENST00000379018 C4orf36Q96KX1 117 aa13.83□□□□□ -0.2
PDLIM4-202ENST00000379018 ENOPH1Q9UHY7 261 aa13.83□□□□□ -0.2
PDLIM4-202ENST00000379018 ZNF107Q9UII5 783 aaPredicted RBP13.83□□□□□ -0.2
PDLIM4-202ENST00000379018 TRIM64CA6NLI5 447 aa13.82□□□□□ -0.2
PDLIM4-202ENST00000379018 OR4C45A6NMZ5 311 aa13.82□□□□□ -0.2
PDLIM4-202ENST00000379018 G3V318 75 aa13.82□□□□□ -0.2
PDLIM4-202ENST00000379018 OVOL1O14753 267 aa13.82□□□□□ -0.2
PDLIM4-202ENST00000379018 SLC31A2O15432 143 aa13.82□□□□□ -0.2
PDLIM4-202ENST00000379018 OR7C1O76099 320 aaPredicted RBP13.82□□□□□ -0.2
PDLIM4-202ENST00000379018 GP9P14770 177 aa13.82□□□□□ -0.2
PDLIM4-202ENST00000379018 CD1BP29016 333 aa13.82□□□□□ -0.2
PDLIM4-202ENST00000379018 ATP6AP1Q15904 470 aa13.82□□□□□ -0.2
PDLIM4-202ENST00000379018 ELP2Q6IA86 826 aa13.82□□□□□ -0.2
PDLIM4-202ENST00000379018 FDX2Q6P4F2 183 aa13.82□□□□□ -0.2
PDLIM4-202ENST00000379018 ZNF429Q86V71 674 aa13.82□□□□□ -0.2
PDLIM4-202ENST00000379018 TMEM104Q8NE00 496 aa13.82□□□□□ -0.2
PDLIM4-202ENST00000379018 OR5D14Q8NGL3 314 aa13.82□□□□□ -0.2
PDLIM4-202ENST00000379018 PELI1Q96FA3 418 aa13.82□□□□□ -0.2
PDLIM4-202ENST00000379018 ALX4Q9H161 411 aaPredicted RBP13.82□□□□□ -0.2
PDLIM4-202ENST00000379018 NCOR1P1Q9H4R4 102 aa13.82□□□□□ -0.2
PDLIM4-202ENST00000379018 VSIG4Q9Y279 399 aa13.82□□□□□ -0.2
PDLIM4-202ENST00000379018 TMEM30CPA0ZSE6 113 aa13.81□□□□□ -0.2
PDLIM4-202ENST00000379018 GABRPO00591 440 aa13.81□□□□□ -0.2
PDLIM4-202ENST00000379018 CDRT1O95170 752 aa13.81□□□□□ -0.2
PDLIM4-202ENST00000379018 KCNJ3P48549 501 aa13.81□□□□□ -0.2
PDLIM4-202ENST00000379018 CCR9P51686 369 aa13.81□□□□□ -0.2
PDLIM4-202ENST00000379018 SLURP1P55000 103 aa13.81□□□□□ -0.2
PDLIM4-202ENST00000379018 TMED1Q13445 227 aa13.81□□□□□ -0.2
PDLIM4-202ENST00000379018 MMDQ15546 238 aa13.81□□□□□ -0.2
PDLIM4-202ENST00000379018 KCTD20Q7Z5Y7 419 aa13.81□□□□□ -0.2
PDLIM4-202ENST00000379018 SERPINA12Q8IW75 414 aa13.81□□□□□ -0.2
PDLIM4-202ENST00000379018 FAM71E2Q8N5Q1 922 aa13.81□□□□□ -0.2
PDLIM4-202ENST00000379018 ZNF491Q8N8L2 437 aa13.81□□□□□ -0.2
PDLIM4-202ENST00000379018 OR10V1Q8NGI7 309 aa13.81□□□□□ -0.2
PDLIM4-202ENST00000379018 GABARAPL1Q9H0R8 117 aa13.81□□□□□ -0.2
PDLIM4-202ENST00000379018 PARP11Q9NR21 331 aa13.81□□□□□ -0.2
PDLIM4-202ENST00000379018 GFOD1Q9NXC2 390 aa13.81□□□□□ -0.2
PDLIM4-202ENST00000379018 DHDHQ9UQ10 334 aa13.81□□□□□ -0.2
PDLIM4-202ENST00000379018 LYSTQ99698 3801 aa13.81□□□□□ -0.2
PDLIM4-202ENST00000379018 I3L521 148 aa13.8□□□□□ -0.2
PDLIM4-202ENST00000379018 MAGEB3O15480 346 aa13.8□□□□□ -0.2
PDLIM4-202ENST00000379018 OR5H8P0DN80 308 aa13.8□□□□□ -0.2
PDLIM4-202ENST00000379018 ATAD3CQ5T2N8 411 aa13.8□□□□□ -0.2
PDLIM4-202ENST00000379018 PXT1Q8NFP0 134 aa13.8□□□□□ -0.2
PDLIM4-202ENST00000379018 OR51A2Q8NGJ7 313 aa13.8□□□□□ -0.2
PDLIM4-202ENST00000379018 UBE2E2Q96LR5 201 aa13.8□□□□□ -0.2
PDLIM4-202ENST00000379018 CITED4Q96RK1 184 aa13.8□□□□□ -0.2
PDLIM4-202ENST00000379018 IMPAD1Q9NX62 359 aa13.8□□□□□ -0.2
PDLIM4-202ENST00000379018 ING4Q9UNL4 249 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms