RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 GHRLQ9UBU3 117 aa13.52□□□□□ -0.25
HMGN4-201ENST00000377575 MCRIP1C9JLW8 97 aa13.51□□□□□ -0.25
HMGN4-201ENST00000377575 J3QR06 171 aa13.51□□□□□ -0.25
HMGN4-201ENST00000377575 AIPO00170 330 aa13.51□□□□□ -0.25
HMGN4-201ENST00000377575 UBBP0CG47 229 aa13.51□□□□□ -0.25
HMGN4-201ENST00000377575 MGMTP16455 207 aa13.51□□□□□ -0.25
HMGN4-201ENST00000377575 GZMHP20718 246 aa13.51□□□□□ -0.25
HMGN4-201ENST00000377575 LTC4SQ16873 150 aa13.51□□□□□ -0.25
HMGN4-201ENST00000377575 GLT8D1Q68CQ7 371 aa13.51□□□□□ -0.25
HMGN4-201ENST00000377575 UNQ9370/PRO34162Q6UXP9 181 aa13.51□□□□□ -0.25
HMGN4-201ENST00000377575 LYPD6Q86Y78 171 aa13.51□□□□□ -0.25
HMGN4-201ENST00000377575 TOMM40LQ969M1 308 aa13.51□□□□□ -0.25
HMGN4-201ENST00000377575 RPEQ96AT9 228 aa13.51□□□□□ -0.25
HMGN4-201ENST00000377575 SELENOIQ9C0D9 397 aa13.51□□□□□ -0.25
HMGN4-201ENST00000377575 RAB9BQ9NP90 201 aa13.51□□□□□ -0.25
HMGN4-201ENST00000377575 WNK1Q9H4A3 2382 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 LY6LH3BQJ8 138 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 PEX14O75381 377 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 HSMCR30P0CW71 290 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 VSIG10L2P0DP72 767 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 CRHBPP24387 322 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 GNG10P50151 68 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 MADCAM1Q13477 382 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 INSL4Q14641 139 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 TRAM1Q15629 374 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 HSD17B12Q53GQ0 312 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 FAM27D1Q5T7N8 215 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 LIPKQ5VXJ0 399 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 RAB12Q6IQ22 244 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 ZNF497Q6ZNH5 498 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 PRSS48Q7RTY5 328 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 RFESDQ8TAC1 157 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 Q96M66 194 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 CCDC90BQ9GZT6 254 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 BANF2Q9H503 90 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 LIN7BQ9HAP6 207 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 ETAA1Q9NY74 926 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 BLOC1S6Q9UL45 172 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 PSG11Q9UQ72 335 aa13.5□□□□□ -0.25
HMGN4-201ENST00000377575 VWFP04275 2813 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 TRAV39A0A0B4J263 110 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 ORC5O43913 435 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 SC5DO75845 299 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 PSMA1P25786 263 aaKnown RBP13.49□□□□□ -0.25
HMGN4-201ENST00000377575 HABP2Q14520 560 aaPredicted RBP13.49□□□□□ -0.25
HMGN4-201ENST00000377575 UTF1Q5T230 341 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 C6orf183Q5T699 404 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 CEACAM19Q7Z692 300 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 TMEM104Q8NE00 496 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 OR52M1Q8NGK5 317 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 OR10X1Q8NGY0 326 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 CCDC107Q8WV48 283 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 LEAP2Q969E1 77 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 ARL11Q969Q4 196 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 FAM46BQ96A09 425 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 CNBD2Q96M20 576 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 SLC25A33Q9BSK2 321 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 ISYNA1Q9NPH2 558 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 PEX16Q9Y5Y5 336 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 CMYA5Q8N3K9 4069 aa13.49□□□□□ -0.25
HMGN4-201ENST00000377575 SDCBPO00560 298 aaPredicted RBP13.48□□□□□ -0.25
HMGN4-201ENST00000377575 CA11O75493 328 aa13.48□□□□□ -0.25
HMGN4-201ENST00000377575 OR2F2O95006 317 aa13.48□□□□□ -0.25
HMGN4-201ENST00000377575 IGHV3-7P01780 117 aa13.48□□□□□ -0.25
HMGN4-201ENST00000377575 MT-ND4P03905 459 aa13.48□□□□□ -0.25
HMGN4-201ENST00000377575 GLAP06280 429 aa13.48□□□□□ -0.25
HMGN4-201ENST00000377575 CSF1P09603 554 aa13.48□□□□□ -0.25
HMGN4-201ENST00000377575 UCHL1P09936 223 aa13.48□□□□□ -0.25
HMGN4-201ENST00000377575 SRMP19623 302 aa13.48□□□□□ -0.25
HMGN4-201ENST00000377575 FUT3P21217 361 aa13.48□□□□□ -0.25
HMGN4-201ENST00000377575 VDAC2P45880 294 aaPredicted RBP13.48□□□□□ -0.25
HMGN4-201ENST00000377575 RAB7AP51149 207 aa13.48□□□□□ -0.25
HMGN4-201ENST00000377575 MLLT11Q13015 90 aaPredicted RBP13.48□□□□□ -0.25
HMGN4-201ENST00000377575 TMEM30BQ3MIR4 351 aa13.48□□□□□ -0.25
HMGN4-201ENST00000377575 TRAT1Q6PIZ9 186 aa13.48□□□□□ -0.25
HMGN4-201ENST00000377575 LRRTM1Q86UE6 522 aa13.48□□□□□ -0.25
HMGN4-201ENST00000377575 CFHR4Q92496 578 aa13.48□□□□□ -0.25
HMGN4-201ENST00000377575 SERTAD4Q9NUC0 356 aa13.48□□□□□ -0.25
HMGN4-201ENST00000377575 TRAPPC2LQ9UL33 140 aa13.48□□□□□ -0.25
HMGN4-201ENST00000377575 RAB26Q9ULW5 256 aa13.48□□□□□ -0.25
HMGN4-201ENST00000377575 MEGF8Q7Z7M0 2845 aa13.47□□□□□ -0.25
HMGN4-201ENST00000377575 C15orf65H3BRN8 121 aa13.47□□□□□ -0.25
HMGN4-201ENST00000377575 SPINT2O43291 252 aa13.47□□□□□ -0.25
HMGN4-201ENST00000377575 PDCD6O75340 191 aa13.47□□□□□ -0.25
HMGN4-201ENST00000377575 TSPAN15O95858 294 aa13.47□□□□□ -0.25
HMGN4-201ENST00000377575 MPIG6BO95866 241 aa13.47□□□□□ -0.25
HMGN4-201ENST00000377575 FAM106CPP0CH98 169 aa13.47□□□□□ -0.25
HMGN4-201ENST00000377575 CD24P25063 80 aa13.47□□□□□ -0.25
HMGN4-201ENST00000377575 GP2P55259 537 aaKnown RBP13.47□□□□□ -0.25
HMGN4-201ENST00000377575 BLCAPP62952 87 aa13.47□□□□□ -0.25
HMGN4-201ENST00000377575 TPBGQ13641 420 aa13.47□□□□□ -0.25
HMGN4-201ENST00000377575 SYT6Q5T7P8 510 aaPredicted RBP13.47□□□□□ -0.25
HMGN4-201ENST00000377575 OR8H3Q8N146 312 aa13.47□□□□□ -0.25
HMGN4-201ENST00000377575 TMEM203Q969S6 136 aa13.47□□□□□ -0.25
HMGN4-201ENST00000377575 RBM14Q96PK6 669 aaKnown RBP13.47□□□□□ -0.25
HMGN4-201ENST00000377575 M0QZK8 103 aa13.46□□□□□ -0.25
HMGN4-201ENST00000377575 FBXO24O75426 580 aa13.46□□□□□ -0.25
HMGN4-201ENST00000377575 ARL6IP5O75915 188 aa13.46□□□□□ -0.25
HMGN4-201ENST00000377575 ATP6V1G2O95670 118 aa13.46□□□□□ -0.25
HMGN4-201ENST00000377575 CPEP16870 476 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms