RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ADGRG7Q96K78 797 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 Q96M66 194 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 HIST1H2AAQ96QV6 131 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 RIMS4Q9H426 269 aaPredicted RBP11.12□□□□□ -0.63
MSH5-204ENST00000375755 CBLN4Q9NTU7 201 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 B3GAT1Q9P2W7 334 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 IL17BQ9UHF5 180 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 GAB2Q9UQC2 676 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 XKRY2A2RUG3 117 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 NPIPB13A6NJU9 1138 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 MARCH11A6NNE9 402 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 NPIPB4C9JG80 1138 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 SLC33A1O00400 549 aaPredicted RBP11.12□□□□□ -0.63
MSH5-204ENST00000375755 NKX2-1P43699 371 aaPredicted RBP11.12□□□□□ -0.63
MSH5-204ENST00000375755 TLE4Q04727 773 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 PNRC1Q12796 327 aaPredicted RBP11.12□□□□□ -0.63
MSH5-204ENST00000375755 GPR137CQ8N3F9 429 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 SRD5A3Q9H8P0 318 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 SDF2L1Q9HCN8 221 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 SERINC1Q9NRX5 453 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 IGHV3-15A0A0B4J1V0 119 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 ZFP92A6NM28 416 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 TMEM50AO95807 157 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 HBE1P02100 147 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 RSPO4Q2I0M5 234 aaPredicted RBP11.12□□□□□ -0.63
MSH5-204ENST00000375755 MPV17LQ2QL34 196 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 CXorf66Q5JRM2 361 aaPredicted RBP11.12□□□□□ -0.63
MSH5-204ENST00000375755 C20orf196Q8IYI0 205 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 DDIT4LQ96D03 193 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 GNPNAT1Q96EK6 184 aaPredicted RBP11.12□□□□□ -0.63
MSH5-204ENST00000375755 LYRM2Q9NU23 88 aaPredicted RBP11.12□□□□□ -0.63
MSH5-204ENST00000375755 A6NNC1 897 aa11.11□□□□□ -0.63
MSH5-204ENST00000375755 TK1P04183 234 aa11.11□□□□□ -0.63
MSH5-204ENST00000375755 MMP7P09237 267 aaPredicted RBP11.11□□□□□ -0.63
MSH5-204ENST00000375755 COA6Q5JTJ3 125 aaKnown RBP11.11□□□□□ -0.63
MSH5-204ENST00000375755 CARD17Q5XLA6 110 aa11.11□□□□□ -0.63
MSH5-204ENST00000375755 TEX38Q6PEX7 206 aa11.11□□□□□ -0.63
MSH5-204ENST00000375755 BRICD5Q6PL45 260 aa11.11□□□□□ -0.63
MSH5-204ENST00000375755 ARL6IP6Q8N6S5 226 aa11.11□□□□□ -0.63
MSH5-204ENST00000375755 B4E171 279 aa11.11□□□□□ -0.63
MSH5-204ENST00000375755 TSPAN7P41732 249 aa11.11□□□□□ -0.63
MSH5-204ENST00000375755 TDGF1P3P51864 188 aa11.11□□□□□ -0.63
MSH5-204ENST00000375755 ZNF133P52736 654 aaPredicted RBP11.11□□□□□ -0.63
MSH5-204ENST00000375755 CLRN1P58418 232 aa11.11□□□□□ -0.63
MSH5-204ENST00000375755 THEM4Q5T1C6 240 aa11.11□□□□□ -0.63
MSH5-204ENST00000375755 C6orf15Q6UXA7 325 aaPredicted RBP11.11□□□□□ -0.63
MSH5-204ENST00000375755 SLC25A26Q70HW3 274 aa11.11□□□□□ -0.63
MSH5-204ENST00000375755 RPS19BP1Q86WX3 136 aaKnown RBP11.11□□□□□ -0.63
MSH5-204ENST00000375755 PGAM5Q96HS1 289 aa11.11□□□□□ -0.63
MSH5-204ENST00000375755 ZNF665Q9H7R5 613 aa11.11□□□□□ -0.63
MSH5-204ENST00000375755 IFNL4K9M1U5 179 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 ETV2O00321 342 aaPredicted RBP11.1□□□□□ -0.63
MSH5-204ENST00000375755 PAX5Q02548 391 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 ZNF154Q13106 437 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 CLN3Q13286 438 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 FADS6Q8N9I5 356 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 ANGPTL4Q9BY76 406 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 LRFN1Q9P244 771 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 ZNF318Q5VUA4 2279 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 OTOGLQ3ZCN5 2332 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 TRDCB7Z8K6 153 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 M0R143 59 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 ANGPTL7O43827 346 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 ZNF883P0CG24 379 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 CEACAM1P13688 526 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 SSR4P51571 173 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 MRGPRX4Q96LA9 322 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 OPN3Q9H1Y3 402 aaPredicted RBP11.1□□□□□ -0.63
MSH5-204ENST00000375755 HIPK2Q9H2X6 1198 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 IGLV3-32A0A0A0MS00 114 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 NXPH3O95157 252 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 CDS2O95674 445 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 BCL2P10415 239 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 SUMO3P55854 103 aaPredicted RBP11.1□□□□□ -0.63
MSH5-204ENST00000375755 VAMP2P63027 116 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 EXT1Q16394 746 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 ZNF100Q8IYN0 542 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 NECAP1Q8NC96 275 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 R3HDM4Q96D70 268 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 CISD1Q9NZ45 108 aaKnown RBP11.1□□□□□ -0.63
MSH5-204ENST00000375755 VAX2Q9UIW0 290 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 LAMP3Q9UQV4 416 aa11.1□□□□□ -0.63
MSH5-204ENST00000375755 PFN1P07737 140 aaKnown RBP11.09□□□□□ -0.63
MSH5-204ENST00000375755 GZMHP20718 246 aa11.09□□□□□ -0.63
MSH5-204ENST00000375755 TUBG1P23258 451 aa11.09□□□□□ -0.63
MSH5-204ENST00000375755 MLF1P58340 268 aa11.09□□□□□ -0.63
MSH5-204ENST00000375755 MOB3AQ96BX8 217 aa11.09□□□□□ -0.63
MSH5-204ENST00000375755 TRAV1-1A0A0B4J248 108 aa11.09□□□□□ -0.63
MSH5-204ENST00000375755 C3orf85A0A1B0GTC6 90 aa11.09□□□□□ -0.63
MSH5-204ENST00000375755 CNOT4O95628 575 aaKnown RBP11.09□□□□□ -0.63
MSH5-204ENST00000375755 NPSP0C0P6 89 aa11.09□□□□□ -0.63
MSH5-204ENST00000375755 RAB4AP20338 218 aa11.09□□□□□ -0.63
MSH5-204ENST00000375755 AADACP22760 399 aa11.09□□□□□ -0.63
MSH5-204ENST00000375755 TAS2R30P59541 319 aa11.09□□□□□ -0.63
MSH5-204ENST00000375755 PMS2P11Q13670 270 aa11.09□□□□□ -0.63
MSH5-204ENST00000375755 SLC25A53Q5H9E4 307 aa11.09□□□□□ -0.63
MSH5-204ENST00000375755 ZNF66Q6ZN08 573 aa11.09□□□□□ -0.63
MSH5-204ENST00000375755 CTDSP1Q9GZU7 261 aa11.09□□□□□ -0.63
MSH5-204ENST00000375755 PIGLQ9Y2B2 252 aa11.09□□□□□ -0.63
MSH5-204ENST00000375755 URB1O60287 2271 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms