RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 CD300LBA8K4G0 201 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 F2RP25116 425 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 S100GP29377 79 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 CLDN18P56856 261 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 RUNX1Q01196 453 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 HIKESHIQ53FT3 197 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 AKR1C8PQ5T2L2 129 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 SLC16A13Q7RTY0 426 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 MRPL30Q8TCC3 161 aaKnown RBP12.43□□□□□ -0.42
MSH5-201ENST00000375703 RDH5Q92781 318 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 MALSU1Q96EH3 234 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 PLK3Q9H4B4 646 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 KIAA1456Q9P272 454 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 METTL1Q9UBP6 276 aaKnown RBP12.43□□□□□ -0.42
MSH5-201ENST00000375703 FRYLO94915 3013 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 LAMTOR5O43504 91 aa12.42□□□□□ -0.42
MSH5-201ENST00000375703 NEURL1O76050 574 aa12.42□□□□□ -0.42
MSH5-201ENST00000375703 SPINK2P20155 84 aa12.42□□□□□ -0.42
MSH5-201ENST00000375703 ARR3P36575 388 aa12.42□□□□□ -0.42
MSH5-201ENST00000375703 PAX9P55771 341 aa12.42□□□□□ -0.42
MSH5-201ENST00000375703 RPS23P62266 143 aaKnown RBP12.42□□□□□ -0.42
MSH5-201ENST00000375703 OR10J5Q8NHC4 309 aa12.42□□□□□ -0.42
MSH5-201ENST00000375703 POM121L2Q96KW2 1035 aa12.42□□□□□ -0.42
MSH5-201ENST00000375703 ZNF703Q9H7S9 590 aaPredicted RBP12.42□□□□□ -0.42
MSH5-201ENST00000375703 TAAR3PQ9P1P4 343 aa12.42□□□□□ -0.42
MSH5-201ENST00000375703 B4GALT7Q9UBV7 327 aa12.42□□□□□ -0.42
MSH5-201ENST00000375703 RNF115Q9Y4L5 304 aa12.42□□□□□ -0.42
MSH5-201ENST00000375703 LIPGQ9Y5X9 500 aa12.42□□□□□ -0.42
MSH5-201ENST00000375703 H3BQ15 152 aa12.42□□□□□ -0.42
MSH5-201ENST00000375703 SRP19P09132 144 aaKnown RBP12.42□□□□□ -0.42
MSH5-201ENST00000375703 SMIM6P0DI80 62 aa12.42□□□□□ -0.42
MSH5-201ENST00000375703 PLP2Q04941 152 aa12.42□□□□□ -0.42
MSH5-201ENST00000375703 IL24Q13007 206 aa12.42□□□□□ -0.42
MSH5-201ENST00000375703 OR5P3Q8WZ94 311 aa12.42□□□□□ -0.42
MSH5-201ENST00000375703 GTF3AQ92664 365 aaKnown RBP12.42□□□□□ -0.42
MSH5-201ENST00000375703 HES7Q9BYE0 225 aa12.42□□□□□ -0.42
MSH5-201ENST00000375703 ERRFI1Q9UJM3 462 aaPredicted RBP12.42□□□□□ -0.42
MSH5-201ENST00000375703 OR2W1Q9Y3N9 320 aa12.42□□□□□ -0.42
MSH5-201ENST00000375703 ANKRD30BLA7E2S9 258 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 FAM166BA8MTA8 275 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 NQO2P16083 231 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 MAS1LP35410 378 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 TLE4Q04727 773 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 ABHD17BQ5VST6 288 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 ZNF324BQ6AW86 544 aaPredicted RBP12.41□□□□□ -0.42
MSH5-201ENST00000375703 APH1AQ96BI3 265 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 GPR146Q96CH1 333 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 ATP5SQ99766 215 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 SS18L1O75177 396 aaPredicted RBP12.41□□□□□ -0.42
MSH5-201ENST00000375703 IFNA17P01571 189 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 IGHV2-5P01817 119 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 SERPINE2P07093 398 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 CEACAM1P13688 526 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 MAGEA5P43359 124 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 ZXDAP98168 799 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 TCEAL6Q6IPX3 200 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 LINC00596Q86U02 117 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 OR51H1Q8NH63 302 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 SMOC1Q9H4F8 434 aa12.41□□□□□ -0.42
MSH5-201ENST00000375703 TRAV24A0A0B4J272 114 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 TRAV20A0A0B4J274 112 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 A0A0G2JRQ6 117 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 C3orf80F5H4A9 247 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 FBP1P09467 338 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 ACP1P24666 158 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 TAGLN2P37802 199 aaKnown RBP12.4□□□□□ -0.42
MSH5-201ENST00000375703 RAB2AP61019 212 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 RPL23AP62750 156 aaKnown RBP12.4□□□□□ -0.42
MSH5-201ENST00000375703 SP5Q6BEB4 398 aaPredicted RBP12.4□□□□□ -0.42
MSH5-201ENST00000375703 STX12Q86Y82 276 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 ZNF573Q86YE8 665 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 FAM58AQ8N1B3 248 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 SEBOXQ9HB31 216 aaPredicted RBP12.4□□□□□ -0.42
MSH5-201ENST00000375703 FREM2Q5SZK8 3169 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 A0A1B0GU03 582 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 ZNF727A8MUV8 499 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 AP4M1O00189 453 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 LILRA1O75019 489 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 SCAF4O95104 1147 aaKnown RBP12.4□□□□□ -0.42
MSH5-201ENST00000375703 PSG2P11465 335 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 TAS2R30P59541 319 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 UBE2KP61086 200 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 GNG3P63215 75 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 ICAM4Q14773 271 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 ZNF429Q86V71 674 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 THNSL2Q86YJ6 484 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 C17orf78Q8N4C9 275 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 IL1F10Q8WWZ1 152 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 RAB39BQ96DA2 213 aa12.4□□□□□ -0.42
MSH5-201ENST00000375703 TRBV6-6A0A0A6YYG2 114 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 H3BP45 60 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 DFFBO76075 338 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 OR8G1Q15617 311 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 SLC25A24Q6NUK1 477 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 HEPN1Q6WQI6 88 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 RNASE11Q8TAA1 199 aaKnown RBP12.39□□□□□ -0.43
MSH5-201ENST00000375703 TCTEX1D2Q8WW35 142 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 RBMXL1Q96E39 390 aaKnown RBP12.39□□□□□ -0.43
MSH5-201ENST00000375703 TCEAL7Q9BRU2 100 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 ZPBPQ9BS86 351 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms