RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 LFNGQ8NES3 379 aa15.51■□□□□ 0.07
PTPDC1-202ENST00000375360 BTBD17A6NE02 478 aa15.51■□□□□ 0.07
PTPDC1-202ENST00000375360 OOEPA6NGQ2 149 aa15.51■□□□□ 0.07
PTPDC1-202ENST00000375360 PRR32B1ATL7 298 aa15.51■□□□□ 0.07
PTPDC1-202ENST00000375360 HNF1AP20823 631 aa15.51■□□□□ 0.07
PTPDC1-202ENST00000375360 UMAD1C9J7I0 102 aa15.51■□□□□ 0.07
PTPDC1-202ENST00000375360 VDAC1P21796 283 aa15.51■□□□□ 0.07
PTPDC1-202ENST00000375360 OR2W1Q9Y3N9 320 aa15.51■□□□□ 0.07
PTPDC1-202ENST00000375360 HEATR5AQ86XA9 2040 aa15.51■□□□□ 0.07
PTPDC1-202ENST00000375360 CHST1O43916 411 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 FGF12P61328 243 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 HLA-DRB3P79483 266 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 COL10A1Q03692 680 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 SURF2Q15527 256 aaPredicted RBP15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 MPPED2Q15777 294 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 VMA21Q3ZAQ7 101 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 TMEM88Q6PEY1 159 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 ZNF485Q8NCK3 441 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 LRFN3Q9BTN0 628 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 RNF122Q9H9V4 155 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 SLC25A4P12235 298 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 PRF1P14222 555 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 USF2Q15853 346 aaPredicted RBP15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 BORCS7Q96B45 105 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 DOCK10Q96BY6 2186 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 ZNF727A8MUV8 499 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 NEURL1O76050 574 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 REG1BP48304 166 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 RPL31P62899 125 aaKnown RBP15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 FDX2Q6P4F2 183 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 TMEM54Q969K7 222 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 ACTR3CQ9C0K3 210 aaPredicted RBP15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 WIPI2Q9Y4P8 454 aa15.5■□□□□ 0.07
PTPDC1-202ENST00000375360 CST4P01036 141 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 IGFBP7Q16270 282 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 FAHD2BQ6P2I3 314 aaPredicted RBP15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 ASB13Q8WXK3 278 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 FAHD2AQ96GK7 314 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 SLC35D1Q9NTN3 355 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 NKX2-6A6NCS4 301 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 ARL3P36405 182 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 AKR1C3P42330 323 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 S100A12P80511 92 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 NSUN5P2Q63ZY6 315 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 ETV3LQ6ZN32 361 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 MDFIC2A0A1B0GVS7 189 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 RAB7AP51149 207 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 ERVS71-1P61550 626 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 DCAF12L2Q5VW00 463 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 ZNF665Q9H7R5 613 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 UQCC1Q9NVA1 299 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 F6UZH7 168 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 CLDN14O95500 239 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 RPS11P62280 158 aaKnown RBP eCLIP15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 CHAC2Q8WUX2 184 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 C14orf79Q96F83 325 aa15.49■□□□□ 0.07
PTPDC1-202ENST00000375360 OR2H2O95918 312 aa15.48■□□□□ 0.07
PTPDC1-202ENST00000375360 GYPAP02724 150 aa15.48■□□□□ 0.07
PTPDC1-202ENST00000375360 ACOT6Q3I5F7 207 aaPredicted RBP15.48■□□□□ 0.07
PTPDC1-202ENST00000375360 NR2C2APQ86WQ0 139 aa15.48■□□□□ 0.07
PTPDC1-202ENST00000375360 TVP23CQ96ET8 276 aa15.48■□□□□ 0.07
PTPDC1-202ENST00000375360 RAB40CQ96S21 281 aa15.48■□□□□ 0.07
PTPDC1-202ENST00000375360 ZGRF1Q86YA3 2104 aa15.48■□□□□ 0.07
PTPDC1-202ENST00000375360 ZNF708P17019 499 aa15.48■□□□□ 0.07
PTPDC1-202ENST00000375360 SLC38A11Q08AI6 406 aa15.48■□□□□ 0.07
PTPDC1-202ENST00000375360 TRAT1Q6PIZ9 186 aa15.48■□□□□ 0.07
PTPDC1-202ENST00000375360 Q6ZT83 130 aa15.48■□□□□ 0.07
PTPDC1-202ENST00000375360 MTCH1Q9NZJ7 389 aa15.48■□□□□ 0.07
PTPDC1-202ENST00000375360 OR2B8PP59922 312 aa15.48■□□□□ 0.07
PTPDC1-202ENST00000375360 GHITMQ9H3K2 345 aa15.48■□□□□ 0.07
PTPDC1-202ENST00000375360 CEP350Q5VT06 3117 aa15.48■□□□□ 0.07
PTPDC1-202ENST00000375360 MIDNQ504T8 468 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 TMEM230Q96A57 120 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 ABHD14BQ96IU4 210 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 MRPL13Q9BYD1 178 aaKnown RBP15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 RHOFQ9HBH0 211 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 HIF1ANQ9NWT6 349 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 TXNL1O43396 289 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 NAT2P11245 290 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 LGALSLQ3ZCW2 172 aaPredicted RBP15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 OR52L2PQ8NGH6 319 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 OR10Z1Q8NGY1 313 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 CISD1Q9NZ45 108 aaKnown RBP15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 CLN8Q9UBY8 286 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 C7orf66A4D0T2 115 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 TMEM210A6NLX4 147 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 OR10J4P0C629 311 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 APELAP0DMC3 54 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 SRSF6Q13247 344 aaKnown RBP15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 PRDM14Q9GZV8 571 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 KPTNQ9Y664 436 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 PPIAL4EA0A075B759 164 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 ARPC4-TTLL3A0A0A6YYG9 625 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 PPIAL4DF5H284 164 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 SYNGR2O43760 224 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 OR4A8P0C604 315 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 PPIAL4FP0DN26 164 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 PSG2P11465 335 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 HMGN3Q15651 99 aa15.47■□□□□ 0.07
PTPDC1-202ENST00000375360 CORO2AQ92828 525 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms