RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 H1FOOQ8IZA3 346 aaPredicted RBP17.41■□□□□ 0.38
COL15A1-201ENST00000375001 FOXJ2Q9P0K8 574 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 TRAV8-7A0A075B6U6 113 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 A0A1B0GV72 72 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 K7ESF4 209 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 C1QL1O75973 258 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 CXCL10P02778 98 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 SRP14P37108 136 aaKnown RBP17.41■□□□□ 0.38
COL15A1-201ENST00000375001 C21orf58P58505 322 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 IRF3Q14653 427 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 TNXAQ16473 311 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 HFEQ30201 348 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 TMEM91Q6ZNR0 172 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 SOX21Q9Y651 276 aaPredicted RBP17.41■□□□□ 0.38
COL15A1-201ENST00000375001 COL16A1Q07092 1604 aaPredicted RBP17.41■□□□□ 0.38
COL15A1-201ENST00000375001 CD74P04233 296 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 VSIG10L2P0DP72 767 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 ACP1P24666 158 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 WNT5AP41221 380 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 WDR25Q64LD2 544 aaPredicted RBP17.41■□□□□ 0.38
COL15A1-201ENST00000375001 GGACTQ9BVM4 153 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 SERGEFQ9UGK8 458 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 C1QCP02747 245 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 TNFRSF1AP19438 455 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 CLDN18P56856 261 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 DMRTA1Q5VZB9 504 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 WFIKKN1Q96NZ8 548 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 OR2J1Q9GZK6 312 aa17.41■□□□□ 0.38
COL15A1-201ENST00000375001 DHRS7CA6NNS2 312 aa17.4■□□□□ 0.38
COL15A1-201ENST00000375001 SLC25A34Q6PIV7 304 aa17.4■□□□□ 0.38
COL15A1-201ENST00000375001 MTURNQ8N3F0 131 aa17.4■□□□□ 0.38
COL15A1-201ENST00000375001 WDR31Q8NA23 367 aa17.4■□□□□ 0.38
COL15A1-201ENST00000375001 OR4X1Q8NH49 305 aa17.4■□□□□ 0.38
COL15A1-201ENST00000375001 GHITMQ9H3K2 345 aa17.4■□□□□ 0.38
COL15A1-201ENST00000375001 SIT1Q9Y3P8 196 aa17.4■□□□□ 0.38
COL15A1-201ENST00000375001 EFNB2P52799 333 aa17.4■□□□□ 0.38
COL15A1-201ENST00000375001 LRRC29Q8WV35 223 aa17.4■□□□□ 0.38
COL15A1-201ENST00000375001 MRGPRX3Q96LB0 322 aa17.4■□□□□ 0.38
COL15A1-201ENST00000375001 ZNF107Q9UII5 783 aaPredicted RBP17.4■□□□□ 0.38
COL15A1-201ENST00000375001 FOXQ1Q9C009 403 aa17.4■□□□□ 0.38
COL15A1-201ENST00000375001 MTCH2Q9Y6C9 303 aa17.4■□□□□ 0.38
COL15A1-201ENST00000375001 COX6CP09669 75 aa17.39■□□□□ 0.37
COL15A1-201ENST00000375001 BMI1P35226 326 aa17.39■□□□□ 0.37
COL15A1-201ENST00000375001 C10orf113Q5VZT2 155 aa17.39■□□□□ 0.37
COL15A1-201ENST00000375001 TUSC5Q8IXB3 177 aa17.39■□□□□ 0.37
COL15A1-201ENST00000375001 HBZP02008 142 aa17.39■□□□□ 0.37
COL15A1-201ENST00000375001 TMEM240Q5SV17 173 aa17.39■□□□□ 0.37
COL15A1-201ENST00000375001 OR8B3Q8NGG8 313 aa17.39■□□□□ 0.37
COL15A1-201ENST00000375001 PERPQ96FX8 193 aa17.39■□□□□ 0.37
COL15A1-201ENST00000375001 GRAMD2BQ96HH9 432 aa17.39■□□□□ 0.37
COL15A1-201ENST00000375001 OR5AC2Q9NZP5 309 aa17.39■□□□□ 0.37
COL15A1-201ENST00000375001 THYN1Q9P016 225 aa17.39■□□□□ 0.37
COL15A1-201ENST00000375001 HOXD4P09016 255 aaPredicted RBP17.39■□□□□ 0.37
COL15A1-201ENST00000375001 HIST1H1BP16401 226 aaKnown RBP17.39■□□□□ 0.37
COL15A1-201ENST00000375001 TMEM50BP56557 158 aa17.39■□□□□ 0.37
COL15A1-201ENST00000375001 COL19A1Q14993 1142 aa17.39■□□□□ 0.37
COL15A1-201ENST00000375001 CXorf51AA0A1B0GTR3 108 aa17.39■□□□□ 0.37
COL15A1-201ENST00000375001 PLPP3O14495 311 aa17.39■□□□□ 0.37
COL15A1-201ENST00000375001 PRICKLE4Q2TBC4 344 aa17.39■□□□□ 0.37
COL15A1-201ENST00000375001 PPP1R3EQ9H7J1 279 aa17.39■□□□□ 0.37
COL15A1-201ENST00000375001 DNPH1O43598 174 aa17.38■□□□□ 0.37
COL15A1-201ENST00000375001 MGAT2Q10469 447 aa17.38■□□□□ 0.37
COL15A1-201ENST00000375001 ZNF788Q6ZQV5 615 aa17.38■□□□□ 0.37
COL15A1-201ENST00000375001 GNRHR2Q96P88 292 aa17.38■□□□□ 0.37
COL15A1-201ENST00000375001 H0YL77 283 aa17.38■□□□□ 0.37
COL15A1-201ENST00000375001 NDUFB4O95168 129 aa17.38■□□□□ 0.37
COL15A1-201ENST00000375001 GZMMP51124 257 aa17.38■□□□□ 0.37
COL15A1-201ENST00000375001 TAS2R60P59551 318 aa17.38■□□□□ 0.37
COL15A1-201ENST00000375001 MRPS11P82912 194 aaKnown RBP17.38■□□□□ 0.37
COL15A1-201ENST00000375001 DNASE2O00115 360 aaPredicted RBP17.38■□□□□ 0.37
COL15A1-201ENST00000375001 PITX3O75364 302 aa17.38■□□□□ 0.37
COL15A1-201ENST00000375001 LHX8Q68G74 356 aa17.38■□□□□ 0.37
COL15A1-201ENST00000375001 MFRPQ9BY79 579 aa17.38■□□□□ 0.37
COL15A1-201ENST00000375001 C3orf80F5H4A9 247 aa17.38■□□□□ 0.37
COL15A1-201ENST00000375001 MPLP40238 635 aa17.38■□□□□ 0.37
COL15A1-201ENST00000375001 FAM157AC9JC47 383 aa17.37■□□□□ 0.37
COL15A1-201ENST00000375001 COX7A1P24310 79 aa17.37■□□□□ 0.37
COL15A1-201ENST00000375001 CBLN3Q6UW01 205 aa17.37■□□□□ 0.37
COL15A1-201ENST00000375001 OR8I2Q8N0Y5 310 aa17.37■□□□□ 0.37
COL15A1-201ENST00000375001 OR11G2Q8NGC1 345 aa17.37■□□□□ 0.37
COL15A1-201ENST00000375001 OR13G1Q8NGZ3 307 aa17.37■□□□□ 0.37
COL15A1-201ENST00000375001 SNRNP40Q96DI7 357 aaKnown RBP17.37■□□□□ 0.37
COL15A1-201ENST00000375001 MYOZ1Q9NP98 299 aaPredicted RBP17.37■□□□□ 0.37
COL15A1-201ENST00000375001 ITGBL1O95965 494 aaPredicted RBP17.37■□□□□ 0.37
COL15A1-201ENST00000375001 MT-ND6P03923 174 aa17.37■□□□□ 0.37
COL15A1-201ENST00000375001 ATOH7Q8N100 152 aa17.37■□□□□ 0.37
COL15A1-201ENST00000375001 TBX21Q9UL17 535 aa17.37■□□□□ 0.37
COL15A1-201ENST00000375001 TPRP12270 2363 aaKnown RBP17.37■□□□□ 0.37
COL15A1-201ENST00000375001 OR4C45A6NMZ5 311 aa17.37■□□□□ 0.37
COL15A1-201ENST00000375001 NPBWR2P48146 333 aa17.37■□□□□ 0.37
COL15A1-201ENST00000375001 OR10S1Q8NGN2 331 aa17.37■□□□□ 0.37
COL15A1-201ENST00000375001 HIST1H4GQ99525 98 aa17.37■□□□□ 0.37
COL15A1-201ENST00000375001 A0A0B4J293 547 aa17.37■□□□□ 0.37
COL15A1-201ENST00000375001 LEPROTL1O95214 131 aa17.37■□□□□ 0.37
COL15A1-201ENST00000375001 A0A1B0GU03 582 aa17.36■□□□□ 0.37
COL15A1-201ENST00000375001 ZNF324O75467 553 aaPredicted RBP17.36■□□□□ 0.37
COL15A1-201ENST00000375001 CT62P0C5K7 136 aa17.36■□□□□ 0.37
COL15A1-201ENST00000375001 HTN1P15515 57 aa17.36■□□□□ 0.37
COL15A1-201ENST00000375001 SAP30LQ9HAJ7 183 aa17.36■□□□□ 0.37
COL15A1-201ENST00000375001 CDC42EP3Q9UKI2 254 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms