RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 NPIPB11E5RHQ5 1161 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 RNASEK-C17orf49H0YIS7 233 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 SRD5A1P18405 259 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 DLX1P56177 255 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 BPIFB3P59826 476 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 C6orf183Q5T699 404 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 OLFML2AQ68BL7 652 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 HCP5Q6MZN7 132 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 MZT2AQ6P582 158 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 ZNF880Q6PDB4 577 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 TRAT1Q6PIZ9 186 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 ZNF554Q86TJ5 538 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 SAMD12Q8N8I0 201 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 OR10A7Q8NGE5 316 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 CCDC107Q8WV48 283 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 PHF21AQ96BD5 680 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 CMSS1Q9BQ75 279 aaKnown RBP12.28□□□□□ -0.44
HSPG2-201ENST00000374673 HEXA-AS1Q9H8Q6 139 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 NDUFA13Q9P0J0 144 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 COMMD3Q9UBI1 195 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 SESN1Q9Y6P5 492 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 IGHV1-69DA0A0B4J2H0 117 aa12.27□□□□□ -0.45
HSPG2-201ENST00000374673 C15orf65H3BRN8 121 aa12.27□□□□□ -0.45
HSPG2-201ENST00000374673 MMP23AO75900 390 aa12.27□□□□□ -0.45
HSPG2-201ENST00000374673 IGHV1-69P01742 117 aa12.27□□□□□ -0.45
HSPG2-201ENST00000374673 GSTP1P09211 210 aaKnown RBP12.27□□□□□ -0.45
HSPG2-201ENST00000374673 FAM157CP0CG43 387 aa12.27□□□□□ -0.45
HSPG2-201ENST00000374673 GNB3P16520 340 aa12.27□□□□□ -0.45
HSPG2-201ENST00000374673 CDK2P24941 298 aa12.27□□□□□ -0.45
HSPG2-201ENST00000374673 SSTR5P35346 364 aa12.27□□□□□ -0.45
HSPG2-201ENST00000374673 KLRD1Q13241 179 aa12.27□□□□□ -0.45
HSPG2-201ENST00000374673 SCGB2A2Q13296 93 aa12.27□□□□□ -0.45
HSPG2-201ENST00000374673 ZNF260Q3ZCT1 412 aa12.27□□□□□ -0.45
HSPG2-201ENST00000374673 PRAMEF5Q5TYX0 476 aa12.27□□□□□ -0.45
HSPG2-201ENST00000374673 OR52W1Q6IF63 320 aa12.27□□□□□ -0.45
HSPG2-201ENST00000374673 ZNF782Q6ZMW2 699 aaPredicted RBP12.27□□□□□ -0.45
HSPG2-201ENST00000374673 Q6ZPA2 131 aa12.27□□□□□ -0.45
HSPG2-201ENST00000374673 C9orf139Q6ZV77 190 aa12.27□□□□□ -0.45
HSPG2-201ENST00000374673 MOB1BQ7L9L4 216 aa12.27□□□□□ -0.45
HSPG2-201ENST00000374673 S100A16Q96FQ6 103 aaKnown RBP12.27□□□□□ -0.45
HSPG2-201ENST00000374673 ZMAT3Q9HA38 289 aaKnown RBP12.27□□□□□ -0.45
HSPG2-201ENST00000374673 C12orf4Q9NQ89 552 aa12.27□□□□□ -0.45
HSPG2-201ENST00000374673 DIABLOQ9NR28 239 aa12.27□□□□□ -0.45
HSPG2-201ENST00000374673 SONP18583 2426 aaKnown RBP12.27□□□□□ -0.45
HSPG2-201ENST00000374673 A0A075B6Q4 140 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 IGHV3OR16-10A0A075B7F0 116 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 A0A087X0M5 115 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 A0A1B0GX30 115 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 DPPA5A6NC42 116 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 C12orf77C9JDV5 145 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 APOA1P02647 267 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 CD3GP09693 182 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 RCC1P18754 421 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-201ENST00000374673 EPHA1P21709 976 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 OMGP23515 440 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 GDNFP39905 211 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 UBE2E1P51965 193 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 PRB3Q04118 309 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-201ENST00000374673 CDNFQ49AH0 187 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 OR13D1Q8NGV5 346 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 ARL11Q969Q4 196 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 KIRREL1Q96J84 757 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 HDHD3Q9BSH5 251 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-201ENST00000374673 TMEM133Q9H2Q1 129 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 CHMP1AQ9HD42 196 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-201ENST00000374673 RAB9BQ9NP90 201 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 IDI2-AS1Q9NZ38 188 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 MGAT4AQ9UM21 535 aa12.26□□□□□ -0.45
HSPG2-201ENST00000374673 NSD1Q96L73 2696 aaPredicted RBP12.25□□□□□ -0.45
HSPG2-201ENST00000374673 F2RL2O00254 374 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 XRCC3O43542 346 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 HPGDSO60760 199 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 EIF4EP06730 217 aaKnown RBP12.25□□□□□ -0.45
HSPG2-201ENST00000374673 CD34P28906 385 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 MRPS15P82914 257 aaKnown RBP12.25□□□□□ -0.45
HSPG2-201ENST00000374673 ARFRP1Q13795 201 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 HMGN3Q15651 99 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 PNLIPRP3Q17RR3 467 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 TUSC1Q2TAM9 212 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 TMEM30BQ3MIR4 351 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 HACD4Q5VWC8 232 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 RUSC1-AS1Q66K80 236 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 BRD3OSQ6XYD6 125 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 PDZD9Q8IXQ8 264 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 OR11H6Q8NGC7 330 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 OR52M1Q8NGK5 317 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 RFESDQ8TAC1 157 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 SLIRPQ9GZT3 109 aaKnown RBP12.25□□□□□ -0.45
HSPG2-201ENST00000374673 MS4A7Q9GZW8 240 aaPredicted RBP12.25□□□□□ -0.45
HSPG2-201ENST00000374673 TAF9BQ9HBM6 251 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 KCNIP1Q9NZI2 227 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 ZNF69Q9UC07 566 aa12.25□□□□□ -0.45
HSPG2-201ENST00000374673 TRAV18A0A075B6X5 111 aa12.24□□□□□ -0.45
HSPG2-201ENST00000374673 IGHV2-26A0A0B4J1V2 119 aa12.24□□□□□ -0.45
HSPG2-201ENST00000374673 TMEM235A6NFC5 223 aa12.24□□□□□ -0.45
HSPG2-201ENST00000374673 SPINT2O43291 252 aa12.24□□□□□ -0.45
HSPG2-201ENST00000374673 HBZP02008 142 aa12.24□□□□□ -0.45
HSPG2-201ENST00000374673 MELTFP08582 738 aa12.24□□□□□ -0.45
HSPG2-201ENST00000374673 FCGR3AP08637 254 aa12.24□□□□□ -0.45
HSPG2-201ENST00000374673 COX7A1P24310 79 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms