RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 KIR2DL2P43627 348 aaPredicted RBP12.58□□□□□ -0.4
TRAF1-201ENST00000373887 CLDN18P56856 261 aa12.58□□□□□ -0.4
TRAF1-201ENST00000373887 ECSCRQ19T08 205 aa12.58□□□□□ -0.4
TRAF1-201ENST00000373887 OR4S2Q8NH73 311 aa12.58□□□□□ -0.4
TRAF1-201ENST00000373887 PTPMT1Q8WUK0 201 aaPredicted RBP12.58□□□□□ -0.4
TRAF1-201ENST00000373887 MFSD2BA6NFX1 497 aa12.58□□□□□ -0.4
TRAF1-201ENST00000373887 PRR35P0CG20 571 aa12.58□□□□□ -0.4
TRAF1-201ENST00000373887 CDKN2AP42771 156 aaKnown RBP12.58□□□□□ -0.4
TRAF1-201ENST00000373887 CBLN2Q8IUK8 224 aa12.58□□□□□ -0.4
TRAF1-201ENST00000373887 NUBPLQ8TB37 319 aa12.58□□□□□ -0.4
TRAF1-201ENST00000373887 MTFP1Q9UDX5 166 aa12.58□□□□□ -0.4
TRAF1-201ENST00000373887 PDCD6O75340 191 aa12.58□□□□□ -0.4
TRAF1-201ENST00000373887 KLF7O75840 302 aaPredicted RBP12.58□□□□□ -0.4
TRAF1-201ENST00000373887 CRYBB2P43320 205 aa12.58□□□□□ -0.4
TRAF1-201ENST00000373887 PRNTQ86SH4 94 aa12.58□□□□□ -0.4
TRAF1-201ENST00000373887 OR4X1Q8NH49 305 aa12.58□□□□□ -0.4
TRAF1-201ENST00000373887 FAM222BQ8WU58 562 aa12.58□□□□□ -0.4
TRAF1-201ENST00000373887 PTX4Q96A99 478 aa12.58□□□□□ -0.4
TRAF1-201ENST00000373887 IGKV3D-15A0A087WSY6 115 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 DHRS7CA6NNS2 312 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 IGKV3-15P01624 115 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 TMUB1Q9BVT8 246 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 OR6C3Q9NZP0 311 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 ATAD5Q96QE3 1844 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 SNRPCP09234 159 aaKnown RBP12.57□□□□□ -0.4
TRAF1-201ENST00000373887 C10orf113Q5VZT2 155 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 OR8B3Q8NGG8 313 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 ADAT3Q96EY9 351 aaPredicted RBP12.57□□□□□ -0.4
TRAF1-201ENST00000373887 OR8B2Q96RD0 313 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 SLC17A5Q9NRA2 495 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 CHST1O43916 411 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 DEDDO75618 318 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 PNLIPP16233 465 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 OR1K1Q8NGR3 316 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 WDR13Q9H1Z4 485 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 IGHV3OR15-7A0A075B7D8 119 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 ELOA3CA0A087WX78 387 aaPredicted RBP12.57□□□□□ -0.4
TRAF1-201ENST00000373887 SMPD2O60906 423 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 KIAA0040Q15053 153 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 TWIST1Q15672 202 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 THSD4Q6ZMP0 1018 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 SOSTQ9BQB4 213 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 SNURFLB1AK76 121 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 GP1BAP07359 652 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 SLC25A1P53007 311 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 GAB4Q2WGN9 574 aa12.57□□□□□ -0.4
TRAF1-201ENST00000373887 SIGIRRQ6IA17 410 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 SPICQ8N5J4 248 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 TMEM74BQ9NUR3 256 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 FXYD1O00168 92 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 PAGE4O60829 102 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 MOGAT3Q86VF5 341 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 CHAC2Q8WUX2 184 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 GCGP01275 180 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 NAT1P18440 290 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 PLAURQ03405 335 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 SPANXN1Q5VSR9 72 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 TTTY12Q9BZ98 90 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 GPR61Q9BZJ8 451 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 UBE2L6O14933 153 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 CA2P00918 260 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 TMPRSS3P57727 454 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 IL24Q13007 206 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 OR8I2Q8N0Y5 310 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 ZNF275Q9NSD4 429 aaPredicted RBP12.56□□□□□ -0.4
TRAF1-201ENST00000373887 CTLA4P16410 223 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 TFPI2P48307 235 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 OR10AC1Q8NH08 325 aa12.56□□□□□ -0.4
TRAF1-201ENST00000373887 BTF3P20290 206 aaKnown RBP12.55□□□□□ -0.4
TRAF1-201ENST00000373887 OR10J1P30954 320 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 OR4A47Q6IF82 309 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 SLC23A3Q6PIS1 610 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 SNRNP40Q96DI7 357 aaKnown RBP12.55□□□□□ -0.4
TRAF1-201ENST00000373887 STARD10Q9Y365 291 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 A0A1W2PPV9 198 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 C17orf47Q8NEP4 570 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 OR8B12Q8NGG6 310 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 PLPP2O43688 288 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 C19orf54Q5BKX5 351 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 ZAR1Q86SH2 424 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 LDLRAD3Q86YD5 345 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 CARFQ8N187 725 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 TMEM52Q8NDY8 209 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 HAND1O96004 215 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 GDF15Q99988 308 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 SLIRPQ9GZT3 109 aaKnown RBP12.55□□□□□ -0.4
TRAF1-201ENST00000373887 DTX4Q9Y2E6 619 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 TNS1Q9HBL0 1735 aaKnown RBP12.55□□□□□ -0.4
TRAF1-201ENST00000373887 LOC107984156A0A0G2JMH3 177 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 TRDCB7Z8K6 153 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 IGF2P01344 180 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 ARL17AQ8IVW1 177 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 C9orf40Q8IXQ3 194 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 GAPTQ8N292 157 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 Q8WTZ3 238 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 ASB10Q8WXI3 467 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 RAB1CQ92928 201 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 DPH3Q96FX2 82 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 OPN3Q9H1Y3 402 aaPredicted RBP12.55□□□□□ -0.4
TRAF1-201ENST00000373887 ZNF552Q9H707 407 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms