RNA–Protein interactions for RNA: ENST00000372384.6

TSC22D3-204, Transcript of TSC22 domain family member 3, human

TSL 2 BASIC

Gene TSC22D3, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC22D3-204	ENST00000372384	UBAC2	Q8NBM4	344 aa		11.91	□□□□□ -0.5
TSC22D3-204	ENST00000372384	GTF3A	Q92664	365 aa	Known RBP	11.91	□□□□□ -0.5
TSC22D3-204	ENST00000372384	RDH5	Q92781	318 aa		11.91	□□□□□ -0.5
TSC22D3-204	ENST00000372384	TMEM56	Q96MV1	263 aa		11.91	□□□□□ -0.5
TSC22D3-204	ENST00000372384	NKX6-2	Q9C056	277 aa	Predicted RBP	11.91	□□□□□ -0.5
TSC22D3-204	ENST00000372384	ARV1	Q9H2C2	271 aa		11.91	□□□□□ -0.5
TSC22D3-204	ENST00000372384	HRH4	Q9H3N8	390 aa		11.91	□□□□□ -0.5
TSC22D3-204	ENST00000372384	C11orf1	Q9H5F2	150 aa		11.91	□□□□□ -0.5
TSC22D3-204	ENST00000372384	TMEM231	Q9H6L2	316 aa		11.91	□□□□□ -0.5
TSC22D3-204	ENST00000372384	TMEM56-RWDD3	S4R434	201 aa		11.91	□□□□□ -0.5
TSC22D3-204	ENST00000372384	NKX2-6	A6NCS4	301 aa		11.9	□□□□□ -0.5
TSC22D3-204	ENST00000372384		J3QT63	122 aa		11.9	□□□□□ -0.5
TSC22D3-204	ENST00000372384	GPR31	O00270	319 aa		11.9	□□□□□ -0.5
TSC22D3-204	ENST00000372384	MED6	O75586	246 aa		11.9	□□□□□ -0.5
TSC22D3-204	ENST00000372384	GLA	P06280	429 aa		11.9	□□□□□ -0.5
TSC22D3-204	ENST00000372384	ERVS71-1	P61550	626 aa		11.9	□□□□□ -0.5
TSC22D3-204	ENST00000372384	GUCA2B	Q16661	112 aa		11.9	□□□□□ -0.5
TSC22D3-204	ENST00000372384	TBC1D28	Q2M2D7	210 aa		11.9	□□□□□ -0.5
TSC22D3-204	ENST00000372384	KRTCAP3	Q53RY4	240 aa		11.9	□□□□□ -0.5
TSC22D3-204	ENST00000372384	C10orf91	Q5T1B1	145 aa		11.9	□□□□□ -0.5
TSC22D3-204	ENST00000372384	EIF5AL1	Q6IS14	154 aa	Known RBP	11.9	□□□□□ -0.5
TSC22D3-204	ENST00000372384	ZNF880	Q6PDB4	577 aa		11.9	□□□□□ -0.5
TSC22D3-204	ENST00000372384	GCNT2	Q8N0V5	402 aa		11.9	□□□□□ -0.5
TSC22D3-204	ENST00000372384	LILRB1	Q8NHL6	650 aa	Predicted RBP	11.9	□□□□□ -0.5
TSC22D3-204	ENST00000372384	SPACA1	Q9HBV2	294 aa		11.9	□□□□□ -0.5
TSC22D3-204	ENST00000372384	POMT1	Q9Y6A1	747 aa		11.9	□□□□□ -0.5
TSC22D3-204	ENST00000372384	HS3ST1	O14792	307 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	GPR137B	O60478	399 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	SRPX	P78539	464 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	GUSBP1	Q15486	140 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	SPIN3	Q5JUX0	258 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384		Q6P435	159 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	BTNL8	Q6UX41	500 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	PUSL1	Q8N0Z8	303 aa	Known RBP	11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	IFT22	Q9H7X7	185 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	ST8SIA3	O43173	380 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	CDS2	O95674	445 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	P2RY1	P47900	373 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	P4HA3	Q7Z4N8	544 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	SELENOH	Q8IZQ5	122 aa	Known RBP	11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	ZNF565	Q8N9K5	539 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	WNT2B	Q93097	391 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	SARAF	Q96BY9	339 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	OR2J1	Q9GZK6	312 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	RIMS4	Q9H426	269 aa	Predicted RBP	11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	CCL28	Q9NRJ3	127 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	FAM96B	Q9Y3D0	163 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384	ATRX	P46100	2492 aa		11.89	□□□□□ -0.51
TSC22D3-204	ENST00000372384		J3QW42	95 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	HSD17B6	O14756	317 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	LYZL6	O75951	148 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	MUC1	P15941	1255 aa	Predicted RBP	11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	IDH3G	P51553	393 aa	Predicted RBP	11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	CAV2	P51636	162 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	PPP1CB	P62140	327 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	HLA-DRB3	P79483	266 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	ALKBH6	Q3KRA9	238 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	FAM76B	Q5HYJ3	339 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	GPR157	Q5UAW9	335 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	CISD2	Q8N5K1	135 aa	Known RBP	11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	TSNAX	Q99598	290 aa	Known RBP	11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	RHOF	Q9HBH0	211 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	ZFP57	Q9NU63	452 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	UBE2J1	Q9Y385	318 aa	Predicted RBP	11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	NBEA	Q8NFP9	2946 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	NDUFA2	O43678	99 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	CTXN2	P0C2S0	81 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	UCP1	P25874	307 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	TDGF1P3	P51864	188 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	CABLES2	Q9BTV7	478 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	ADAT1	Q9BUB4	502 aa	Known RBP	11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	PARP11	Q9NR21	331 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	UQCC1	Q9NVA1	299 aa		11.88	□□□□□ -0.51
TSC22D3-204	ENST00000372384	ERVK11-1	P61568	191 aa		11.87	□□□□□ -0.51
TSC22D3-204	ENST00000372384	NHLH2	Q02577	135 aa		11.87	□□□□□ -0.51
TSC22D3-204	ENST00000372384	GABRA6	Q16445	453 aa		11.87	□□□□□ -0.51
TSC22D3-204	ENST00000372384	NMS	Q5H8A3	153 aa		11.87	□□□□□ -0.51
TSC22D3-204	ENST00000372384		Q6ZRG5	221 aa		11.87	□□□□□ -0.51
TSC22D3-204	ENST00000372384	SCCPDH	Q8NBX0	429 aa		11.87	□□□□□ -0.51
TSC22D3-204	ENST00000372384	SNRNP40	Q96DI7	357 aa	Known RBP	11.87	□□□□□ -0.51
TSC22D3-204	ENST00000372384	BOD1	Q96IK1	185 aa		11.87	□□□□□ -0.51
TSC22D3-204	ENST00000372384	TRIB1	Q96RU8	372 aa		11.87	□□□□□ -0.51
TSC22D3-204	ENST00000372384	RTL8A	Q9BWD3	113 aa		11.87	□□□□□ -0.51
TSC22D3-204	ENST00000372384	TLNRD1	Q9H1K6	362 aa		11.87	□□□□□ -0.51
TSC22D3-204	ENST00000372384	TREM1	Q9NP99	234 aa		11.87	□□□□□ -0.51
TSC22D3-204	ENST00000372384	LRP5L	A4QPB2	252 aa		11.86	□□□□□ -0.51
TSC22D3-204	ENST00000372384		F8W036	122 aa		11.86	□□□□□ -0.51
TSC22D3-204	ENST00000372384	ZNF44	P15621	663 aa		11.86	□□□□□ -0.51
TSC22D3-204	ENST00000372384	BLOC1S1	P78537	153 aa		11.86	□□□□□ -0.51
TSC22D3-204	ENST00000372384	FAM214B	Q7L5A3	538 aa		11.86	□□□□□ -0.51
TSC22D3-204	ENST00000372384	ZNF695	Q8IW36	515 aa		11.86	□□□□□ -0.51
TSC22D3-204	ENST00000372384	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.86	□□□□□ -0.51
TSC22D3-204	ENST00000372384	SVBP	Q8N300	66 aa		11.86	□□□□□ -0.51
TSC22D3-204	ENST00000372384	LYPD6B	Q8NI32	183 aa		11.86	□□□□□ -0.51
TSC22D3-204	ENST00000372384	PLPPR1	Q8TBJ4	325 aa		11.86	□□□□□ -0.51
TSC22D3-204	ENST00000372384	SLC25A40	Q8TBP6	338 aa		11.86	□□□□□ -0.51
TSC22D3-204	ENST00000372384	NRIP2	Q9BQI9	281 aa		11.86	□□□□□ -0.51
TSC22D3-204	ENST00000372384	GINS3	Q9BRX5	216 aa		11.86	□□□□□ -0.51
TSC22D3-204	ENST00000372384	CDH20	Q9HBT6	801 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms