RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ARHGAP5-AS1Q96IT6 56 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 RAB40CQ96S21 281 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 MAP1LC3CQ9BXW4 147 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 PLXNA1Q9UIW2 1896 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 TMEM30CPA0ZSE6 113 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 COX7A2P2O60397 106 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 NDUFC2O95298 119 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 INHBBP09529 407 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 SRSF4Q08170 494 aaKnown RBP11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 CD226Q15762 336 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 C8orf82Q6P1X6 216 aaPredicted RBP11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 BEND2Q8NDZ0 799 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 ASB5Q8WWX0 329 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 PIK3IP1Q96FE7 263 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 CDK2AP1O14519 115 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 ASB10Q8WXI3 467 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 CLDN23Q96B33 292 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 UQCC1Q9NVA1 299 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 PIPOXQ9P0Z9 390 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 DLL1O00548 723 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 PCBP3P57721 371 aaKnown RBP11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 SP6Q3SY56 376 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 TMEM136Q6ZRR5 245 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 C9orf40Q8IXQ3 194 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 OR8I2Q8N0Y5 310 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 C17orf47Q8NEP4 570 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 NEU1Q99519 415 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 EPPINO95925 133 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 ANKRD34CP0C6C1 535 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 FGF5P12034 268 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 LIFP15018 202 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 OR52E5Q8NH55 327 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 ZNF721Q8TF20 911 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 RNF2Q99496 336 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 ALX4Q9H161 411 aaPredicted RBP11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 LIPT2A6NK58 231 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 ZNF816Q0VGE8 651 aaPredicted RBP11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 DMRTC1Q5HYR2 192 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 OR4C13Q8NGP0 309 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 TTTY12Q9BZ98 90 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 LPAR3Q9UBY5 353 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 IGHV1-45A0A0A0MS14 117 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 CCL2P13500 99 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 HTR1DP28221 377 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 YAE1D1Q9NRH1 226 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 MASP2O00187 686 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 GCSHP23434 173 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 HERVK_113P61574 105 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 PRDX4Q13162 271 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 CSRP2Q16527 193 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 NAA60Q9H7X0 242 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 LOC285556D6RIA3 1793 aa11.72□□□□□ -0.53
RAPGEF1-201ENST00000372189 ADAM20O43506 726 aa11.71□□□□□ -0.53
RAPGEF1-201ENST00000372189 FAM87AP0C7U9 286 aa11.71□□□□□ -0.53
RAPGEF1-201ENST00000372189 DMKNQ6E0U4 476 aaPredicted RBP11.71□□□□□ -0.53
RAPGEF1-201ENST00000372189 SEC11CQ9BY50 192 aa11.71□□□□□ -0.53
RAPGEF1-201ENST00000372189 MIXL1Q9H2W2 232 aa11.71□□□□□ -0.53
RAPGEF1-201ENST00000372189 TMEM74BQ9NUR3 256 aa11.71□□□□□ -0.53
RAPGEF1-201ENST00000372189 FBXL17Q9UF56 701 aa11.71□□□□□ -0.53
RAPGEF1-201ENST00000372189 CDRT15L2A8MXV6 281 aa11.71□□□□□ -0.53
RAPGEF1-201ENST00000372189 NKX2-8O15522 239 aa11.71□□□□□ -0.53
RAPGEF1-201ENST00000372189 DHRS3O75911 302 aa11.71□□□□□ -0.53
RAPGEF1-201ENST00000372189 ZBTB25P24278 435 aa11.71□□□□□ -0.53
RAPGEF1-201ENST00000372189 MRPL54Q6P161 138 aaKnown RBP11.71□□□□□ -0.53
RAPGEF1-201ENST00000372189 MOB3BQ86TA1 216 aa11.71□□□□□ -0.53
RAPGEF1-201ENST00000372189 CXorf65A6NEN9 183 aa11.71□□□□□ -0.54
RAPGEF1-201ENST00000372189 HKR1P10072 659 aa11.71□□□□□ -0.54
RAPGEF1-201ENST00000372189 THSD4Q6ZMP0 1018 aa11.71□□□□□ -0.54
RAPGEF1-201ENST00000372189 TMEM183AQ8IXX5 376 aa11.71□□□□□ -0.54
RAPGEF1-201ENST00000372189 OR5C1Q8NGR4 320 aa11.71□□□□□ -0.54
RAPGEF1-201ENST00000372189 MYO16Q9Y6X6 1858 aa11.71□□□□□ -0.54
RAPGEF1-201ENST00000372189 SH2D7A6NKC9 451 aaPredicted RBP11.71□□□□□ -0.54
RAPGEF1-201ENST00000372189 SIGLEC5O15389 551 aa11.71□□□□□ -0.54
RAPGEF1-201ENST00000372189 SMIM17P0DL12 118 aa11.71□□□□□ -0.54
RAPGEF1-201ENST00000372189 KISS1Q15726 138 aa11.71□□□□□ -0.54
RAPGEF1-201ENST00000372189 OR4B1Q8NGF8 309 aa11.71□□□□□ -0.54
RAPGEF1-201ENST00000372189 LSM2Q9Y333 95 aaKnown RBP11.71□□□□□ -0.54
RAPGEF1-201ENST00000372189 C3orf85A0A1B0GTC6 90 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 A0A1B0GTH9 108 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 YIF1AO95070 293 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 HLA-DRB3P79483 266 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 CLEC18BQ6UXF7 455 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 CXXC4Q9H2H0 198 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 ATG4DQ86TL0 474 aaPredicted RBP11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 C17orf78Q8N4C9 275 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 TRPM6Q9BX84 2022 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 SEMG1P04279 462 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 PTGFRP43088 359 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 JOSD1Q15040 202 aaPredicted RBP11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 OR8B3Q8NGG8 313 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 NAGKQ9UJ70 344 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 MFSD2BA6NFX1 497 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 CDKN2AP42771 156 aaKnown RBP11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 SLC38A11Q08AI6 406 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 KRTCAP3Q53RY4 240 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 OR11H7Q8NGC8 314 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 VN1R17PQ8TDU5 208 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 B4DEV8 164 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 ZNF737O75373 536 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 HIST1H1EP10412 219 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms