RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 RCL1Q9Y2P8 373 aaKnown RBP9.84□□□□□ -0.83
TSPAN1-201ENST00000372003 PUS1Q9Y606 427 aaKnown RBP eCLIP9.84□□□□□ -0.83
TSPAN1-201ENST00000372003 A0A1W2PNR3 127 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 ZNF587BE7ETH6 402 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 TNFSF11O14788 317 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 QDPRP09417 244 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 OR13C7P0DN81 318 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 PPP1CCP36873 323 aaKnown RBP9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 TAGLN2P37802 199 aaKnown RBP9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 GUCA1AP43080 201 aaPredicted RBP9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 GLIPR1P48060 266 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 NDUFA6P56556 154 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 CLDN18P56856 261 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 UBE2KP61086 200 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 PNRC1Q12796 327 aaPredicted RBP9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 ELOBQ15370 118 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 RSU1Q15404 277 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 KHDC3LQ587J8 217 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 C10orf128Q5T292 105 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 SLC22A25Q6T423 547 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 TMEM182Q6ZP80 229 aaPredicted RBP9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 C6orf201Q7Z4U5 140 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 DOLPP1Q86YN1 238 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 FBXL14Q8N1E6 418 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 CPNE4Q96A23 557 aaPredicted RBP9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 RAB39BQ96DA2 213 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 PARP12Q9H0J9 701 aaKnown RBP9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 SLC2A9Q9NRM0 540 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 ZNF835Q9Y2P0 537 aa9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 PRRC2CQ9Y520 2896 aaKnown RBP9.83□□□□□ -0.84
TSPAN1-201ENST00000372003 TRAV1-1A0A0B4J248 108 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 CLEC18AA5D8T8 446 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 AQP7P3A6NL99 342 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 IFITM10A6NMD0 228 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 ZNF850A8MQ14 1090 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 PPP1R2P9O14990 202 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 PTBP3O95758 552 aaKnown RBP9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 MSR1P21757 451 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 CSNK1A1P48729 337 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 RBP2P50120 134 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 CASP6P55212 293 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 CLDN15P56746 228 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 PKIAP61925 76 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 CNN3Q15417 329 aaKnown RBP9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 SRSF7Q16629 238 aaKnown RBP eCLIP9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 LYZL2Q7Z4W2 148 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 GGNQ86UU5 652 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 HSD17B11Q8NBQ5 300 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 CLEC18CQ8NCF0 446 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 OR2G3Q8NGZ4 309 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 PRDM14Q9GZV8 571 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 SH3BGRL3Q9H299 93 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 ZNF286AQ9HBT8 521 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 IL36GQ9NZH8 169 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 FAM208BQ5VWN6 2430 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 CFAP46Q8IYW2 2715 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 COL6A6A6NMZ7 2263 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 NCKAP5O14513 1909 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 TRBV23-1A0A0A0MS06 115 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 A0A0J9YW62 118 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 ZNF724A8MTY0 619 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 TRDCB7Z8K6 153 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 SCAF4O95104 1147 aaKnown RBP9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 ATP6V0CP27449 155 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 CDAP32320 146 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 FHITP49789 147 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 RND2P52198 227 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 MTCP1P56278 107 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 RND3P61587 244 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 NHLH2Q02577 135 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 TLE4Q04727 773 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 OR8G1Q15617 311 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 ZNF674Q2M3X9 581 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 ACSF3Q4G176 576 aaPredicted RBP9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 REC114Q7Z4M0 266 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 RPRMLQ8N4K4 120 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 ZNF383Q8NA42 475 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 AKR7LQ8NHP1 331 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 GTF3AQ92664 365 aaKnown RBP9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 TMEM54Q969K7 222 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 SLAMF9Q96A28 289 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 SGK3Q96BR1 496 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 RCC1LQ96I51 464 aaKnown RBP9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 ZNF845Q96IR2 970 aaPredicted RBP9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 TRIB1Q96RU8 372 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 NIPSNAP3BQ9BS92 247 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 LYRM2Q9NU23 88 aaPredicted RBP9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 AK3Q9UIJ7 227 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 PIGLQ9Y2B2 252 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 ALPK2Q86TB3 2170 aa9.82□□□□□ -0.84
TSPAN1-201ENST00000372003 GJE1A6NN92 205 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 AHRRA9YTQ3 701 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 XRCC2O43543 280 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 CXCL13O43927 109 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 YIF1AO95070 293 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 DIRAS3O95661 229 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 PLA2G2AP14555 144 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 GABRR1P24046 479 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 CARD18P57730 90 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms