RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 MMP23AO75900 390 aa12.09□□□□□ -0.47
COL9A1-204ENST00000370496 MT-ND4P03905 459 aa12.09□□□□□ -0.47
COL9A1-204ENST00000370496 SNRPBP14678 240 aaKnown RBP12.09□□□□□ -0.47
COL9A1-204ENST00000370496 SERPINB10P48595 397 aa12.09□□□□□ -0.47
COL9A1-204ENST00000370496 NCS1P62166 190 aa12.09□□□□□ -0.47
COL9A1-204ENST00000370496 TRAT1Q6PIZ9 186 aa12.09□□□□□ -0.47
COL9A1-204ENST00000370496 FAAP24Q9BTP7 215 aa12.09□□□□□ -0.47
COL9A1-204ENST00000370496 RAB9BQ9NP90 201 aa12.09□□□□□ -0.47
COL9A1-204ENST00000370496 IDI2-AS1Q9NZ38 188 aa12.09□□□□□ -0.47
COL9A1-204ENST00000370496 GABARAPO95166 117 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 VENTXO95231 258 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 TFAP2AP05549 437 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 GDNFP39905 211 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 ALDH3B2P48448 385 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 VBP1P61758 197 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 GPR107Q5VW38 600 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 ZNF626Q68DY1 528 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 BAIAP2L2Q6UXY1 529 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 SLC16A12Q6ZSM3 486 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 RTN4RL2Q86UN3 420 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 CROCCP3Q8IVE0 287 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 PRR18Q8N4B5 295 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 FAM89BQ8N5H3 189 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 RFESDQ8TAC1 157 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 SETD6Q8TBK2 473 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 ARL11Q969Q4 196 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 PTX4Q96A99 478 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 RAB3CQ96E17 227 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 ARHGAP5-AS1Q96IT6 56 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 KIRREL1Q96J84 757 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 CYYR1Q96J86 154 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 DUX5Q96PT3 197 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 ATG5Q9H1Y0 275 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 SCOCQ9UIL1 159 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 HSF4Q9ULV5 492 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 ETV7Q9Y603 341 aa12.08□□□□□ -0.48
COL9A1-204ENST00000370496 A0A075B6Q4 140 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 ODF3BA8MYP8 253 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 TRIM77I1YAP6 450 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 SPINT2O43291 252 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 HOXA3O43365 443 aaPredicted RBP12.07□□□□□ -0.48
COL9A1-204ENST00000370496 GZMHP20718 246 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 MRPS15P82914 257 aaKnown RBP12.07□□□□□ -0.48
COL9A1-204ENST00000370496 TUSC1Q2TAM9 212 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 Q6ZTK2 550 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 ANKRD13BQ86YJ7 626 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 GAPTQ8N292 157 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 ABHD12Q8N2K0 398 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 OR11H6Q8NGC7 330 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 UBALD1Q8TB05 177 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 NDNFQ8TB73 568 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 MRPL30Q8TCC3 161 aaKnown RBP12.07□□□□□ -0.48
COL9A1-204ENST00000370496 PECRQ9BY49 303 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 NAA50Q9GZZ1 169 aaKnown RBP12.07□□□□□ -0.48
COL9A1-204ENST00000370496 ZMAT3Q9HA38 289 aaKnown RBP12.07□□□□□ -0.48
COL9A1-204ENST00000370496 ZNF286AQ9HBT8 521 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 ESM1Q9NQ30 184 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 C12orf4Q9NQ89 552 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 KCNIP1Q9NZI2 227 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 AK3Q9UIJ7 227 aa12.07□□□□□ -0.48
COL9A1-204ENST00000370496 TBL2Q9Y4P3 447 aaKnown RBP12.07□□□□□ -0.48
COL9A1-204ENST00000370496 BTBD17A6NE02 478 aa12.06□□□□□ -0.48
COL9A1-204ENST00000370496 FOXI3A8MTJ6 420 aaPredicted RBP12.06□□□□□ -0.48
COL9A1-204ENST00000370496 C12orf77C9JDV5 145 aa12.06□□□□□ -0.48
COL9A1-204ENST00000370496 SDCBPO00560 298 aaPredicted RBP12.06□□□□□ -0.48
COL9A1-204ENST00000370496 TOR1AO14656 332 aa12.06□□□□□ -0.48
COL9A1-204ENST00000370496 ORC5O43913 435 aa12.06□□□□□ -0.48
COL9A1-204ENST00000370496 MELTFP08582 738 aa12.06□□□□□ -0.48
COL9A1-204ENST00000370496 RCC1P18754 421 aaPredicted RBP12.06□□□□□ -0.48
COL9A1-204ENST00000370496 RPS19P39019 145 aaKnown RBP12.06□□□□□ -0.48
COL9A1-204ENST00000370496 SCAND1P57086 179 aa12.06□□□□□ -0.48
COL9A1-204ENST00000370496 UBA52P62987 128 aaKnown RBP12.06□□□□□ -0.48
COL9A1-204ENST00000370496 KRTAP21-3Q3LHN1 58 aa12.06□□□□□ -0.48
COL9A1-204ENST00000370496 MOGAT2Q3SYC2 334 aa12.06□□□□□ -0.48
COL9A1-204ENST00000370496 MOB1BQ7L9L4 216 aa12.06□□□□□ -0.48
COL9A1-204ENST00000370496 LDLRAD3Q86YD5 345 aa12.06□□□□□ -0.48
COL9A1-204ENST00000370496 OR10A7Q8NGE5 316 aa12.06□□□□□ -0.48
COL9A1-204ENST00000370496 OR10R2Q8NGX6 335 aa12.06□□□□□ -0.48
COL9A1-204ENST00000370496 ZNF596Q8TC21 504 aa12.06□□□□□ -0.48
COL9A1-204ENST00000370496 SSMEM1Q8WWF3 244 aa12.06□□□□□ -0.48
COL9A1-204ENST00000370496 TNFRSF19Q9NS68 423 aa12.06□□□□□ -0.48
COL9A1-204ENST00000370496 RHBDL2Q9NX52 303 aa12.06□□□□□ -0.48
COL9A1-204ENST00000370496 ZNRD1Q9P1U0 126 aa12.06□□□□□ -0.48
COL9A1-204ENST00000370496 NPIPB11E5RHQ5 1161 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 NOL3O60936 208 aaKnown RBP12.05□□□□□ -0.48
COL9A1-204ENST00000370496 TMEM127O75204 238 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 SCGNO76038 276 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 CD3GP09693 182 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 CGB3P0DN86 165 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 CGB7P0DN87 165 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 HIST1H1DP16402 221 aaKnown RBP12.05□□□□□ -0.48
COL9A1-204ENST00000370496 CD34P28906 385 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 RPL5P46777 297 aaKnown RBP12.05□□□□□ -0.48
COL9A1-204ENST00000370496 GNG10P50151 68 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 PLAC9Q5JTB6 97 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 Q6YL49 198 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 LHFPL4Q7Z7J7 247 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 ZDHHC22Q8N966 263 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 C17orf50Q8WW18 174 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 TMEM158Q8WZ71 300 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms