RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 GLIPR1P48060 266 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 HLA-DRB3P79483 266 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 SRSF7Q16629 238 aaKnown RBP eCLIP11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 ASCC1Q8N9N2 400 aaKnown RBP11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 ANGPTL6Q8NI99 470 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 FAM222BQ8WU58 562 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 CHIAQ9BZP6 476 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 GPN1Q9HCN4 374 aaPredicted RBP11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 RNF7Q9UBF6 113 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 PPP1R3CQ9UQK1 317 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 NPTNQ9Y639 398 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 H3BUI4 141 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 GABRA2P47869 451 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 DHODHQ02127 395 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 EFNB3Q15768 340 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 LY6G6FQ5SQ64 297 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 FIP1L1Q6UN15 594 aaKnown RBP11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 LYG2Q86SG7 212 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 PRR18Q8N4B5 295 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 OR2AK2Q8NG84 335 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 OR11H4Q8NGC9 324 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 OR11L1Q8NGX0 322 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 CASTOR1Q8WTX7 329 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 GPHA2Q96T91 129 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 RASL12Q9NYN1 266 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 DNAJB11Q9UBS4 358 aa11.78□□□□□ -0.52
HMGCS2-201ENST00000369406 YLPM1P49750 1951 aaKnown RBP11.77□□□□□ -0.52
HMGCS2-201ENST00000369406 USF3Q68DE3 2245 aa11.77□□□□□ -0.52
HMGCS2-201ENST00000369406 MDH2P40926 338 aaKnown RBP11.77□□□□□ -0.52
HMGCS2-201ENST00000369406 TMEM185AQ8NFB2 350 aa11.77□□□□□ -0.52
HMGCS2-201ENST00000369406 MOB3AQ96BX8 217 aa11.77□□□□□ -0.52
HMGCS2-201ENST00000369406 ZNF436Q9C0F3 470 aaPredicted RBP11.77□□□□□ -0.52
HMGCS2-201ENST00000369406 DLL4Q9NR61 685 aa11.77□□□□□ -0.52
HMGCS2-201ENST00000369406 MBNL3Q9NUK0 354 aaKnown RBP11.77□□□□□ -0.52
HMGCS2-201ENST00000369406 PRELID1Q9Y255 219 aa11.77□□□□□ -0.52
HMGCS2-201ENST00000369406 BOLA1Q9Y3E2 137 aa11.77□□□□□ -0.52
HMGCS2-201ENST00000369406 IFNL4K9M1U5 179 aa11.77□□□□□ -0.53
HMGCS2-201ENST00000369406 CCSO14618 274 aa11.77□□□□□ -0.53
HMGCS2-201ENST00000369406 GOSR2O14653 212 aa11.77□□□□□ -0.53
HMGCS2-201ENST00000369406 PGAM2P15259 253 aa11.77□□□□□ -0.53
HMGCS2-201ENST00000369406 TNFSF4P23510 183 aa11.77□□□□□ -0.53
HMGCS2-201ENST00000369406 VAMP1P23763 118 aa11.77□□□□□ -0.53
HMGCS2-201ENST00000369406 SLC9A3R2Q15599 337 aa11.77□□□□□ -0.53
HMGCS2-201ENST00000369406 ANKRD55Q3KP44 614 aa11.77□□□□□ -0.53
HMGCS2-201ENST00000369406 ZFP69Q49AA0 526 aa11.77□□□□□ -0.53
HMGCS2-201ENST00000369406 STUMQ69YW2 141 aa11.77□□□□□ -0.53
HMGCS2-201ENST00000369406 ZNF843Q8N446 348 aa11.77□□□□□ -0.53
HMGCS2-201ENST00000369406 OR13A1Q8NGR1 328 aa11.77□□□□□ -0.53
HMGCS2-201ENST00000369406 OR1L1Q8NH94 360 aa11.77□□□□□ -0.53
HMGCS2-201ENST00000369406 DHRS9Q9BPW9 319 aa11.77□□□□□ -0.53
HMGCS2-201ENST00000369406 RIMS4Q9H426 269 aaPredicted RBP11.77□□□□□ -0.53
HMGCS2-201ENST00000369406 SAP30LQ9HAJ7 183 aa11.77□□□□□ -0.53
HMGCS2-201ENST00000369406 CENPEQ02224 2701 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 C12orf77C9JDV5 145 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 TUSC2O75896 110 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 PPYP01298 95 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 GYPAP02724 150 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 EDDM3AQ14507 147 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 HMGN3Q15651 99 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 CLEC18BQ6UXF7 455 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 MUC15Q8N387 334 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 ZNF808Q8N4W9 903 aaPredicted RBP11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 C12orf45Q8N5I9 185 aaPredicted RBP11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 SPICQ8N5J4 248 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 IL1F10Q8WWZ1 152 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 LRRC46Q96FV0 321 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 GAFA1Q96PS6 74 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 DYNLRB1Q9NP97 96 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 TRAPPC2LQ9UL33 140 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 TENM4Q6N022 2769 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 DOCK11Q5JSL3 2073 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 LYNX1G3V0Z9 82 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 LYNX1P0DP58 116 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 PHLDA2Q53GA4 152 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 FAM216BQ8N7L0 139 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 MRGPRDQ8TDS7 321 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 CCL13Q99616 98 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 CABLES2Q9BTV7 478 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 TAF9BQ9HBM6 251 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 PLSCR3Q9NRY6 295 aa11.76□□□□□ -0.53
HMGCS2-201ENST00000369406 TRBV6-7A0A0A0MS04 114 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 KIR2DS1A0A191URI9 304 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 TMEM30CPA0ZSE6 113 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 B9A039 149 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 CD8AP01732 235 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 ZNF728P0DKX0 622 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 ANXA3P12429 323 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 SSTR5P35346 364 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 KIR2DS4P43632 304 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 KCNJ3P48549 501 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 IL13RA1P78552 427 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 KIR2DS1Q14954 304 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 TESK1Q15569 626 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 KRBOX4Q5JUW0 171 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 UTF1Q5T230 341 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 SLC35E4Q6ICL7 350 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 MITD1Q8WV92 249 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 GLS2Q9UI32 602 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 LOC105371267A0A1B0GV96 52 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 B8ZZF3 427 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms