RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 WNT1P04628 370 aa8.55□□□□□ -1.04
SCNM1-202ENST00000368905 ZNF19P17023 458 aa8.55□□□□□ -1.04
SCNM1-202ENST00000368905 RIPPLY3P57055 190 aa8.55□□□□□ -1.04
SCNM1-202ENST00000368905 FABP9Q0Z7S8 132 aa8.55□□□□□ -1.04
SCNM1-202ENST00000368905 CNIH2Q6PI25 160 aa8.55□□□□□ -1.04
SCNM1-202ENST00000368905 GPR135Q8IZ08 494 aa8.55□□□□□ -1.04
SCNM1-202ENST00000368905 C11orf42Q8N5U0 333 aa8.55□□□□□ -1.04
SCNM1-202ENST00000368905 OR5M3Q8NGP4 307 aa8.55□□□□□ -1.04
SCNM1-202ENST00000368905 IL22RA2Q969J5 263 aa8.55□□□□□ -1.04
SCNM1-202ENST00000368905 HIST1H2BAQ96A08 127 aa8.55□□□□□ -1.04
SCNM1-202ENST00000368905 OR6C1Q96RD1 312 aa8.55□□□□□ -1.04
SCNM1-202ENST00000368905 ISG20L2Q9H9L3 353 aaKnown RBP8.55□□□□□ -1.04
SCNM1-202ENST00000368905 IER3IP1Q9Y5U9 82 aa8.55□□□□□ -1.04
SCNM1-202ENST00000368905 U3KQ87 197 aa8.55□□□□□ -1.04
SCNM1-202ENST00000368905 COL6A3P12111 3177 aa8.55□□□□□ -1.04
SCNM1-202ENST00000368905 THADAQ6YHU6 1953 aa8.55□□□□□ -1.04
SCNM1-202ENST00000368905 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 IGHV5-51A0A0C4DH38 117 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 TMEM218A2RU14 115 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 MAP1LC3B2A6NCE7 125 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 ARL6IP5O75915 188 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 CD79AP11912 226 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 GNMTQ14749 295 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 DMRTC1Q5HYR2 192 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 HLA-DQA1Q5Y7H0 255 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 TOMM20LQ6UXN7 152 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 RPTNQ6XPR3 784 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 TMEM91Q6ZNR0 172 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 WFDC8Q8IUA0 241 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 ZNF439Q8NDP4 499 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 GPX7Q96SL4 187 aaPredicted RBP8.54□□□□□ -1.04
SCNM1-202ENST00000368905 SOSTQ9BQB4 213 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 MAP1LC3BQ9GZQ8 125 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 RAB22AQ9UL26 194 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 ETV7Q9Y603 341 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 A0A1W2PRE2 83 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 TMEM72A0PK05 275 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 A8MXK9 166 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 HLA-DQB1P01920 261 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 MBPP02686 304 aaPredicted RBP8.54□□□□□ -1.04
SCNM1-202ENST00000368905 MRPL3P09001 348 aaKnown RBP8.54□□□□□ -1.04
SCNM1-202ENST00000368905 RPL12P30050 165 aaKnown RBP8.54□□□□□ -1.04
SCNM1-202ENST00000368905 GFERP55789 205 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 ZNF121P58317 390 aaPredicted RBP8.54□□□□□ -1.04
SCNM1-202ENST00000368905 ZNF85Q03923 595 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 OR5I1Q13606 314 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 EIF2B1Q14232 305 aaKnown RBP8.54□□□□□ -1.04
SCNM1-202ENST00000368905 ELAVL1Q15717 326 aaKnown RBP8.54□□□□□ -1.04
SCNM1-202ENST00000368905 DEFB133Q30KQ1 61 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 DMKNQ6E0U4 476 aaPredicted RBP8.54□□□□□ -1.04
SCNM1-202ENST00000368905 RPL22L1Q6P5R6 122 aaKnown RBP8.54□□□□□ -1.04
SCNM1-202ENST00000368905 FA2HQ7L5A8 372 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 CEACAM19Q7Z692 300 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 SLC35F2Q8IXU6 374 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 IZUMO1Q8IYV9 350 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 KIR3DL3Q8N743 410 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 OR6K6Q8NGW6 343 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 OR4C3Q8NH37 302 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 OR4K13Q8NH42 304 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 OR14A16Q8NHC5 309 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 ST6GAL2Q96JF0 529 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 FYTTD1Q96QD9 318 aaKnown RBP8.54□□□□□ -1.04
SCNM1-202ENST00000368905 RBP7Q96R05 134 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 MEGF9Q9H1U4 602 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 FNDC4Q9H6D8 234 aaPredicted RBP8.54□□□□□ -1.04
SCNM1-202ENST00000368905 AK6Q9Y3D8 172 aaKnown RBP8.54□□□□□ -1.04
SCNM1-202ENST00000368905 WSB1Q9Y6I7 421 aa8.54□□□□□ -1.04
SCNM1-202ENST00000368905 TRAV1-2A0A0B4J238 106 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 ZC3H12DA2A288 527 aaKnown RBP8.53□□□□□ -1.04
SCNM1-202ENST00000368905 H3BTX0 84 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 PPIHO43447 177 aaKnown RBP8.53□□□□□ -1.04
SCNM1-202ENST00000368905 MPDU1O75352 247 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 MMP23AO75900 390 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 HPNP05981 417 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 PYCR1P32322 319 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 RFX2P48378 723 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 KLRB1Q12918 225 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 NNATQ16517 81 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 COL5A1-AS1Q5SY13 56 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 LAMTOR1Q6IAA8 161 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 GCSAMQ8N6F7 178 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 OR10G4Q8NGN3 311 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 RNF122Q9H9V4 155 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 PRO0628Q9UI54 55 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 FBXL2Q9UKC9 423 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 RCL1Q9Y2P8 373 aaKnown RBP8.53□□□□□ -1.04
SCNM1-202ENST00000368905 A0A1B0GW55 424 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 DEGS1O15121 323 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 OR7C2O60412 319 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 EIF4EBP3O60516 100 aaPredicted RBP8.53□□□□□ -1.04
SCNM1-202ENST00000368905 EIF4E2O60573 245 aaKnown RBP8.53□□□□□ -1.04
SCNM1-202ENST00000368905 MT-CO3P00414 261 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 IGHV2-5P01817 119 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 TACSTD2P09758 323 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 DUX4L2P0CJ85 424 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 DUX4L3P0CJ86 424 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 DUX4L5P0CJ88 424 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 DUX4L6P0CJ89 424 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 DUX4L7P0CJ90 424 aa8.53□□□□□ -1.04
SCNM1-202ENST00000368905 HOXB4P17483 251 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms