RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 CEACAM19Q7Z692 300 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 GAPTQ8N292 157 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 LEAP2Q969E1 77 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 CNBD2Q96M20 576 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 SELENOIQ9C0D9 397 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 MMP28Q9H239 520 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 SPACA1Q9HBV2 294 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 TCF7L1Q9HCS4 588 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 RAB26Q9ULW5 256 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 IGHV3-7P01780 117 aa15.19■□□□□ 0.02
CKS1B-203ENST00000368439 CPEP16870 476 aa15.19■□□□□ 0.02
CKS1B-203ENST00000368439 GZMHP20718 246 aa15.19■□□□□ 0.02
CKS1B-203ENST00000368439 VHLP40337 213 aa15.19■□□□□ 0.02
CKS1B-203ENST00000368439 MAP2K4P45985 399 aa15.19■□□□□ 0.02
CKS1B-203ENST00000368439 RPS25P62851 125 aaKnown RBP15.19■□□□□ 0.02
CKS1B-203ENST00000368439 MLLT11Q13015 90 aaPredicted RBP15.19■□□□□ 0.02
CKS1B-203ENST00000368439 HABP2Q14520 560 aaPredicted RBP15.19■□□□□ 0.02
CKS1B-203ENST00000368439 RBM48Q5RL73 367 aaKnown RBP15.19■□□□□ 0.02
CKS1B-203ENST00000368439 C11orf88Q6PI97 169 aa15.19■□□□□ 0.02
CKS1B-203ENST00000368439 Q6ZS46 218 aa15.19■□□□□ 0.02
CKS1B-203ENST00000368439 OR2T6Q8NHC8 308 aa15.19■□□□□ 0.02
CKS1B-203ENST00000368439 TMEM203Q969S6 136 aa15.19■□□□□ 0.02
CKS1B-203ENST00000368439 CREB3L1Q96BA8 519 aa15.19■□□□□ 0.02
CKS1B-203ENST00000368439 SERTAD4Q9NUC0 356 aa15.19■□□□□ 0.02
CKS1B-203ENST00000368439 GHRLQ9UBU3 117 aa15.19■□□□□ 0.02
CKS1B-203ENST00000368439 PSG11Q9UQ72 335 aa15.19■□□□□ 0.02
CKS1B-203ENST00000368439 TET2Q6N021 2002 aaPredicted RBP15.18■□□□□ 0.02
CKS1B-203ENST00000368439 TIMM23O14925 209 aa15.18■□□□□ 0.02
CKS1B-203ENST00000368439 CRTAPO75718 401 aaPredicted RBP15.18■□□□□ 0.02
CKS1B-203ENST00000368439 CD24P25063 80 aa15.18■□□□□ 0.02
CKS1B-203ENST00000368439 CEACAM3P40198 252 aa15.18■□□□□ 0.02
CKS1B-203ENST00000368439 BLCAPP62952 87 aa15.18■□□□□ 0.02
CKS1B-203ENST00000368439 LTC4SQ16873 150 aa15.18■□□□□ 0.02
CKS1B-203ENST00000368439 HSD17B12Q53GQ0 312 aa15.18■□□□□ 0.02
CKS1B-203ENST00000368439 RAB12Q6IQ22 244 aa15.18■□□□□ 0.02
CKS1B-203ENST00000368439 SLC16A12Q6ZSM3 486 aa15.18■□□□□ 0.02
CKS1B-203ENST00000368439 CCDC107Q8WV48 283 aa15.18■□□□□ 0.02
CKS1B-203ENST00000368439 GFI1Q99684 422 aa15.18■□□□□ 0.02
CKS1B-203ENST00000368439 CCDC90BQ9GZT6 254 aa15.18■□□□□ 0.02
CKS1B-203ENST00000368439 OOSP1A8MZH6 123 aa15.17■□□□□ 0.02
CKS1B-203ENST00000368439 MCRIP1C9JLW8 97 aa15.17■□□□□ 0.02
CKS1B-203ENST00000368439 AIPO00170 330 aa15.17■□□□□ 0.02
CKS1B-203ENST00000368439 ORC5O43913 435 aa15.17■□□□□ 0.02
CKS1B-203ENST00000368439 HSMCR30P0CW71 290 aa15.17■□□□□ 0.02
CKS1B-203ENST00000368439 VSIG8P0DPA2 414 aa15.17■□□□□ 0.02
CKS1B-203ENST00000368439 LOXL3P58215 753 aa15.17■□□□□ 0.02
CKS1B-203ENST00000368439 DIAPH2-AS1Q14236 149 aa15.17■□□□□ 0.02
CKS1B-203ENST00000368439 RBM39Q14498 530 aaKnown RBP15.17■□□□□ 0.02
CKS1B-203ENST00000368439 GLT8D1Q68CQ7 371 aa15.17■□□□□ 0.02
CKS1B-203ENST00000368439 FAM53AQ6NSI3 398 aaPredicted RBP15.17■□□□□ 0.02
CKS1B-203ENST00000368439 KLHDC1Q8N7A1 406 aa15.17■□□□□ 0.02
CKS1B-203ENST00000368439 NEK7Q8TDX7 302 aa15.17■□□□□ 0.02
CKS1B-203ENST00000368439 WIPF2Q8TF74 440 aaPredicted RBP15.17■□□□□ 0.02
CKS1B-203ENST00000368439 CFHR4Q92496 578 aa15.17■□□□□ 0.02
CKS1B-203ENST00000368439 ARL11Q969Q4 196 aa15.17■□□□□ 0.02
CKS1B-203ENST00000368439 FAM46BQ96A09 425 aa15.17■□□□□ 0.02
CKS1B-203ENST00000368439 MGLLQ99685 303 aa15.17■□□□□ 0.02
CKS1B-203ENST00000368439 PEX16Q9Y5Y5 336 aa15.17■□□□□ 0.02
CKS1B-203ENST00000368439 FAM90A9PA6NNJ1 464 aa15.16■□□□□ 0.02
CKS1B-203ENST00000368439 M0QZ24 198 aa15.16■□□□□ 0.02
CKS1B-203ENST00000368439 SLC22A1O15245 554 aa15.16■□□□□ 0.02
CKS1B-203ENST00000368439 GLAP06280 429 aa15.16■□□□□ 0.02
CKS1B-203ENST00000368439 UBBP0CG47 229 aa15.16■□□□□ 0.02
CKS1B-203ENST00000368439 FUT3P21217 361 aa15.16■□□□□ 0.02
CKS1B-203ENST00000368439 BRS3P32247 399 aa15.16■□□□□ 0.02
CKS1B-203ENST00000368439 QRFPP83859 136 aa15.16■□□□□ 0.02
CKS1B-203ENST00000368439 UNC119Q13432 240 aa15.16■□□□□ 0.02
CKS1B-203ENST00000368439 HERPUD1Q15011 391 aa15.16■□□□□ 0.02
CKS1B-203ENST00000368439 TBCEQ15813 527 aaPredicted RBP15.16■□□□□ 0.02
CKS1B-203ENST00000368439 OR10K2Q6IF99 312 aa15.16■□□□□ 0.02
CKS1B-203ENST00000368439 DTX3Q8N9I9 347 aa15.16■□□□□ 0.02
CKS1B-203ENST00000368439 OR52M1Q8NGK5 317 aa15.16■□□□□ 0.02
CKS1B-203ENST00000368439 UBALD1Q8TB05 177 aa15.16■□□□□ 0.02
CKS1B-203ENST00000368439 CST11Q9H112 138 aa15.16■□□□□ 0.02
CKS1B-203ENST00000368439 LIN7BQ9HAP6 207 aa15.16■□□□□ 0.02
CKS1B-203ENST00000368439 ETAA1Q9NY74 926 aa15.16■□□□□ 0.02
CKS1B-203ENST00000368439 MEGF8Q7Z7M0 2845 aa15.16■□□□□ 0.02
CKS1B-203ENST00000368439 A0A1W2PPI3 338 aa15.15■□□□□ 0.02
CKS1B-203ENST00000368439 C12orf77C9JDV5 145 aa15.15■□□□□ 0.02
CKS1B-203ENST00000368439 MPIG6BO95866 241 aa15.15■□□□□ 0.02
CKS1B-203ENST00000368439 GNG10P50151 68 aa15.15■□□□□ 0.02
CKS1B-203ENST00000368439 FABP5Q01469 135 aa15.15■□□□□ 0.02
CKS1B-203ENST00000368439 TRAM1Q15629 374 aa15.15■□□□□ 0.02
CKS1B-203ENST00000368439 SYT6Q5T7P8 510 aaPredicted RBP15.15■□□□□ 0.02
CKS1B-203ENST00000368439 HIST2H2BDQ6DRA6 164 aa15.15■□□□□ 0.02
CKS1B-203ENST00000368439 C16orf82Q7Z2V1 217 aa15.15■□□□□ 0.02
CKS1B-203ENST00000368439 OR4K15Q8NH41 348 aa15.15■□□□□ 0.02
CKS1B-203ENST00000368439 PRSS22Q9GZN4 317 aa15.15■□□□□ 0.02
CKS1B-203ENST00000368439 WNT10AQ9GZT5 417 aa15.15■□□□□ 0.02
CKS1B-203ENST00000368439 KCNK15Q9H427 330 aa15.15■□□□□ 0.02
CKS1B-203ENST00000368439 GFOD1Q9NXC2 390 aa15.15■□□□□ 0.02
CKS1B-203ENST00000368439 AMMECR1Q9Y4X0 333 aaPredicted RBP15.15■□□□□ 0.02
CKS1B-203ENST00000368439 A0A1W2PPE3 182 aa15.14■□□□□ 0.01
CKS1B-203ENST00000368439 UBE2QL1A1L167 161 aa15.14■□□□□ 0.01
CKS1B-203ENST00000368439 TMEM14DPA8MWL7 114 aa15.14■□□□□ 0.01
CKS1B-203ENST00000368439 PDCD6O75340 191 aa15.14■□□□□ 0.01
CKS1B-203ENST00000368439 CA11O75493 328 aa15.14■□□□□ 0.01
CKS1B-203ENST00000368439 PSMA1P25786 263 aaKnown RBP15.14■□□□□ 0.01
CKS1B-203ENST00000368439 HTR2CP28335 458 aa15.14■□□□□ 0.01
CKS1B-203ENST00000368439 RPS27AP62979 156 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms