RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 Q6ZTK2 550 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 SLC36A1Q7Z2H8 476 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 OR8H2Q8N162 312 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 CHST4Q8NCG5 386 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 OR8B3Q8NGG8 313 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 NUDCD2Q8WVJ2 157 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 RAB40AQ8WXH6 277 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 ST8SIA4Q92187 359 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 UPRTQ96BW1 309 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 RAB3CQ96E17 227 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 NEIL1Q96FI4 390 aaPredicted RBP6.7□□□□□ -1.34
MRPL55-211ENST00000366738 SNX22Q96L94 193 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 CMTM3Q96MX0 182 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 NEDD4LQ96PU5 975 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 OR8B2Q96RD0 313 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 FAAP24Q9BTP7 215 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 MS4A7Q9GZW8 240 aaPredicted RBP6.7□□□□□ -1.34
MRPL55-211ENST00000366738 DNTTIP1Q9H147 329 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 SEBOXQ9HB31 216 aaPredicted RBP6.7□□□□□ -1.34
MRPL55-211ENST00000366738 TNFRSF19Q9NS68 423 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 C19orf12Q9NSK7 152 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 SLC25A10Q9UBX3 287 aaPredicted RBP6.7□□□□□ -1.34
MRPL55-211ENST00000366738 MIOXQ9UGB7 285 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 GLS2Q9UI32 602 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 AK3Q9UIJ7 227 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 A3GALT2U3KPV4 340 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 V9GYH0 126 aa6.7□□□□□ -1.34
MRPL55-211ENST00000366738 TRAV18A0A075B6X5 111 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 TRAV40A0A0B4J280 105 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 IGHV2-70DA0A0C4DH43 119 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 METTL21EPA6NDL7 271 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 MEIS3P1A6NDR6 274 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 FAM181BA6NEQ2 426 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 TIMM23O14925 209 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 HOXA3O43365 443 aaPredicted RBP6.69□□□□□ -1.34
MRPL55-211ENST00000366738 XRCC3O43542 346 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 NDUFB3O43676 98 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 NDUFA2O43678 99 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 SSX5O60225 188 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 CSN2P05814 226 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 NDUFB7P17568 137 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 FUT3P21217 361 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 RANBP1P43487 201 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 GLIPR1P48060 266 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 EDDM3BP56851 147 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 GNB2P62879 340 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 GUCA2AQ02747 115 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 AESQ08117 197 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 ZNF273Q14593 569 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 ESCO2Q56NI9 601 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 RNASE12Q5GAN4 147 aaKnown RBP6.69□□□□□ -1.34
MRPL55-211ENST00000366738 WDR25Q64LD2 544 aaPredicted RBP6.69□□□□□ -1.34
MRPL55-211ENST00000366738 BRD3OSQ6XYD6 125 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 C9orf139Q6ZV77 190 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 NLRC3Q7RTR2 1065 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 C5orf24Q7Z6I8 188 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 CCDC190Q86UF4 302 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 FAM110DQ8TAY7 271 aaPredicted RBP6.69□□□□□ -1.34
MRPL55-211ENST00000366738 MRPL30Q8TCC3 161 aaKnown RBP6.69□□□□□ -1.34
MRPL55-211ENST00000366738 NEK7Q8TDX7 302 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 MAFIPQ8WZ33 124 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 H1FXQ92522 213 aaKnown RBP6.69□□□□□ -1.34
MRPL55-211ENST00000366738 DIRAS2Q96HU8 199 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 NUDT16L1Q9BRJ7 211 aaKnown RBP6.69□□□□□ -1.34
MRPL55-211ENST00000366738 DCTN5Q9BTE1 182 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 SSBP3Q9BWW4 388 aaPredicted RBP6.69□□□□□ -1.34
MRPL55-211ENST00000366738 FAM234AQ9H0X4 552 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 AUNIPQ9H7T9 357 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 BEX1Q9HBH7 125 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 SPACA1Q9HBV2 294 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 PLEKHJ1Q9NW61 149 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 ETAA1Q9NY74 926 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 HSF4Q9ULV5 492 aa6.69□□□□□ -1.34
MRPL55-211ENST00000366738 A0A0A6YYH2 397 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 KIR2DS1A0A191URI9 304 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 A0A1B0GUS0 222 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 MEIOCA2RUB1 952 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 CLPSL1A2RUU4 121 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 A6NJ64 397 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 MCRIP1C9JLW8 97 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 G3V4G9 280 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 MGST3O14880 152 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 SCGNO76038 276 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 HLA-DQB1P01920 261 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 FCER2P06734 321 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 PPIAL4GP0DN37 164 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 P2RX3P56373 397 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 IL18Q14116 193 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 ZNF79Q15937 498 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 DEFB112Q30KQ8 113 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 BEAN1Q3B7T3 259 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 CDNFQ49AH0 187 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 LRRC10Q5BKY1 277 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 KRBOX4Q5JUW0 171 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 ZNF497Q6ZNH5 498 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 BTN2A1Q7KYR7 527 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 SNX29P2Q8IUI4 249 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 MFSD4AQ8N468 514 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 OR13A1Q8NGR1 328 aa6.68□□□□□ -1.34
MRPL55-211ENST00000366738 OR4F5Q8NH21 305 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms