RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 SAV1Q9H4B6 383 aaPredicted RBP11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 FCGR2CP31995 323 aa11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 F2RL1P55085 397 aa11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 S100A12P80511 92 aa11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 SWI5Q1ZZU3 235 aa11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 HFEQ30201 348 aa11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 ABCA11PQ4W5N1 156 aa11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 GGNBP1Q5YKI7 109 aa11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 DHRS11Q6UWP2 260 aa11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 TMEM108Q6UXF1 575 aa11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 CMSS1Q9BQ75 279 aaKnown RBP11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 TMEM231Q9H6L2 316 aa11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 RCC2Q9P258 522 aaKnown RBP11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 IGKV1-27A0A075B6S5 117 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 OR5B21A6NL26 309 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 IQCF6A8MYZ5 107 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 HEXAP06865 529 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 ZNF728P0DKX0 622 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 CA6P23280 308 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 GPM6AP51674 278 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 PSG7Q13046 419 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 PDZK1IP1Q13113 114 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 IGFBP7Q16270 282 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 WFDC8Q8IUA0 241 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 BBC3Q96PG8 261 aaPredicted RBP11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 FAAP24Q9BTP7 215 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 NGBQ9NPG2 151 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 IGKV1D-8A0A087WSZ0 117 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 PQLC2LA1A4F0 135 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 ZNF732B4DXR9 585 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 E5RGE8 158 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 SPRY1O43609 319 aaPredicted RBP11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 THBDP07204 575 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 MUC1P15941 1255 aaPredicted RBP11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 RPS23P62266 143 aaKnown RBP11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 GNG3P63215 75 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 ALKBH6Q3KRA9 238 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 TMEM268Q5VZI3 342 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 BTNL8Q6UX41 500 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 OR5P3Q8WZ94 311 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 SYT3Q9BQG1 590 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 RTL8AQ9BWD3 113 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 SUCNR1Q9BXA5 334 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 FGF23Q9GZV9 251 aaPredicted RBP11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 NSG2Q9Y328 171 aa11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 LSM5Q9Y4Y9 91 aaKnown RBP11.18□□□□□ -0.62
SQSTM1-201ENST00000360718 PLCE1Q9P212 2302 aa11.17□□□□□ -0.62
SQSTM1-201ENST00000360718 BORCS7-ASMTA0A0B4J1R7 106 aa11.17□□□□□ -0.62
SQSTM1-201ENST00000360718 FAM90A27PA6NNH2 459 aa11.17□□□□□ -0.62
SQSTM1-201ENST00000360718 TIMM8AO60220 97 aaPredicted RBP11.17□□□□□ -0.62
SQSTM1-201ENST00000360718 FBXO24O75426 580 aa11.17□□□□□ -0.62
SQSTM1-201ENST00000360718 PTAFRP25105 342 aa11.17□□□□□ -0.62
SQSTM1-201ENST00000360718 MPV17P39210 176 aa11.17□□□□□ -0.62
SQSTM1-201ENST00000360718 FABP6P51161 128 aa11.17□□□□□ -0.62
SQSTM1-201ENST00000360718 PIGPP57054 158 aa11.17□□□□□ -0.62
SQSTM1-201ENST00000360718 HMGN3Q15651 99 aa11.17□□□□□ -0.62
SQSTM1-201ENST00000360718 ASCL4Q6XD76 172 aa11.17□□□□□ -0.62
SQSTM1-201ENST00000360718 CBLN2Q8IUK8 224 aa11.17□□□□□ -0.62
SQSTM1-201ENST00000360718 ZNF611Q8N823 705 aa11.17□□□□□ -0.62
SQSTM1-201ENST00000360718 HPSE2Q8WWQ2 592 aa11.17□□□□□ -0.62
SQSTM1-201ENST00000360718 FAM212BQ9NTI7 297 aaPredicted RBP11.17□□□□□ -0.62
SQSTM1-201ENST00000360718 FBXL17Q9UF56 701 aa11.17□□□□□ -0.62
SQSTM1-201ENST00000360718 AK3Q9UIJ7 227 aa11.17□□□□□ -0.62
SQSTM1-201ENST00000360718 ERRFI1Q9UJM3 462 aaPredicted RBP11.17□□□□□ -0.62
SQSTM1-201ENST00000360718 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 NKX2-6A6NCS4 301 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 ZNF98A6NK75 572 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 ANGPTL7O43827 346 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 CD40P25942 277 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 GRNP28799 593 aaKnown RBP11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 GLRXP35754 106 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 LPAR6P43657 344 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 HAAOP46952 286 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 DVL1P1P54792 670 aaPredicted RBP11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 TMEM33P57088 247 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 TAF9Q16594 264 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 FBXL19-AS1Q494R0 122 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 MBNL2Q5VZF2 373 aaKnown RBP11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 ZNF573Q86YE8 665 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 MKXQ8IYA7 352 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 UBAC2Q8NBM4 344 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 CA5BP1Q8WTZ4 195 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 GALNT14Q96FL9 552 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 SULT4A1Q9BR01 284 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 HDHD3Q9BSH5 251 aaPredicted RBP11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 ADAT1Q9BUB4 502 aaKnown RBP11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 NAA60Q9H7X0 242 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 BIN3Q9NQY0 253 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 CD5P06127 495 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 FCGR3AP08637 254 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 SFTA3P0C7M3 94 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 KITLGP21583 273 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 GNLYP22749 145 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 NPBWR1P48145 328 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 RAB13P51153 203 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 MSMPQ1L6U9 139 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 GPR157Q5UAW9 335 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 SLC25A26Q70HW3 274 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 COMMD1Q8N668 190 aa11.16□□□□□ -0.62
SQSTM1-201ENST00000360718 LRTM2Q8N967 370 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms