RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 MPLP40238 635 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 Q6ZNB5 142 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 HS3ST3A1Q9Y663 406 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 FRG2CA6NGY1 282 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 KIR2DS2P43631 304 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 FBLN7Q53RD9 439 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 C1QL4Q86Z23 238 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 C5orf66Q9H5L9 145 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 B3GAT1Q9P2W7 334 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 NOTCH1P46531 2555 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 ADH4P08319 380 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 CD1CP29017 333 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 RIPPLY3P57055 190 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 KISS1Q15726 138 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 CADM4Q8NFZ8 388 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 SMIM8Q96KF7 97 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 TMEM208Q9BTX3 173 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 FLRT3Q9NZU0 649 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 SNURFLB1AK76 121 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 VSIG8P0DPA2 414 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 GDF1P27539 372 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 ISXQ2M1V0 245 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 C6orf201Q7Z4U5 140 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 SPSB1Q96BD6 273 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 PMCHL2Q9BQD1 86 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 CCL26Q9Y258 94 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 A0A1B0GTI1 187 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 C4orf47A7E2U8 309 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 NEURL1O76050 574 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 AGAP20933 346 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 GPX4P36969 197 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-203ENST00000358544 CSRP3P50461 194 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 RABEPKQ7Z6M1 372 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 OR1L3Q8NH93 324 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 Q8WTZ3 238 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-203ENST00000358544 WBP2Q969T9 261 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 PTRH2Q9Y3E5 179 aaKnown RBP5.35□□□□□ -1.55
VPS13B-203ENST00000358544 TIMM9Q9Y5J7 89 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 VWA8A3KMH1 1905 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 RNF222A6NCQ9 220 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 B4GALT1P15291 398 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 GFI1BQ5VTD9 330 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 METRNLQ641Q3 311 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 TMEM116Q8NCL8 245 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 NPEPL1Q8NDH3 523 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 OR8B3Q8NGG8 313 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 OR5A2Q8NGI9 324 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 ADAT3Q96EY9 351 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-203ENST00000358544 UTP23Q9BRU9 249 aaKnown RBP5.35□□□□□ -1.55
VPS13B-203ENST00000358544 DERL1Q9BUN8 251 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 C6orf106Q9H6K1 298 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-203ENST00000358544 HDGFL3Q9Y3E1 203 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 PLXNB3Q9ULL4 1909 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 A0A0G2JK05 382 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 VDAC1P21796 283 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 EIF3IQ13347 325 aaKnown RBP5.35□□□□□ -1.55
VPS13B-203ENST00000358544 TGIF2LYQ8IUE0 185 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 SH3BGRL3Q9H299 93 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 SF3B6Q9Y3B4 125 aaKnown RBP5.35□□□□□ -1.55
VPS13B-203ENST00000358544 IGSF23A1L1A6 192 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 IL3RAP26951 378 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 CAMPP49913 170 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 LCN2P80188 198 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 DPTQ07507 201 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 ZNF141Q15928 474 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 SLC25A28Q96A46 364 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 COL25A1Q9BXS0 654 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-203ENST00000358544 CEBPBP17676 345 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 TDGF1P3P51864 188 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 MFAP2P55001 183 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 UBE2L3P68036 154 aaKnown RBP5.35□□□□□ -1.55
VPS13B-203ENST00000358544 SERF2P84101 59 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 SSX8Q7RTT4 187 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 LPAR2Q9HBW0 351 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 GPR27Q9NS67 375 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 KLHDC2Q9Y2U9 406 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 PIAS2O75928 621 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 ACTL6AO96019 429 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 OTX1P32242 354 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-203ENST00000358544 CA13Q8N1Q1 262 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 RFLNBQ8N5W9 214 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 MRGPRX4Q96LA9 322 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 EFSO43281 561 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 CXorf1O96002 111 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 CFIP05156 583 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 LDLRAD2Q5SZI1 272 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 VN1R2Q8NFZ6 395 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 SSMEM1Q8WWF3 244 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 SPCS1Q9Y6A9 102 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 GALR2O43603 387 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-203ENST00000358544 CHST1O43916 411 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 CYC1P08574 325 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 CYBAP13498 195 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 OR11L1Q8NGX0 322 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 SH2D2AQ9NP31 389 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 ZNF236Q9UL36 1845 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 RIGQ13278 110 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 RUNX2Q13950 521 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 VHLLQ6RSH7 139 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms