RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 ASCL4Q6XD76 172 aa8.46□□□□□ -1.06
CAPN3-204ENST00000356316 LINC00596Q86U02 117 aa8.46□□□□□ -1.06
CAPN3-204ENST00000356316 STX19Q8N4C7 294 aa8.46□□□□□ -1.06
CAPN3-204ENST00000356316 COMMD1Q8N668 190 aa8.46□□□□□ -1.06
CAPN3-204ENST00000356316 Q8NFD4 153 aa8.46□□□□□ -1.06
CAPN3-204ENST00000356316 OR51A2Q8NGJ7 313 aa8.46□□□□□ -1.06
CAPN3-204ENST00000356316 ARL11Q969Q4 196 aa8.46□□□□□ -1.06
CAPN3-204ENST00000356316 SLC29A1Q99808 456 aa8.46□□□□□ -1.06
CAPN3-204ENST00000356316 MCRIP2Q9BUT9 160 aaKnown RBP8.46□□□□□ -1.06
CAPN3-204ENST00000356316 GON7Q9BXV9 100 aa8.46□□□□□ -1.06
CAPN3-204ENST00000356316 RAB9BQ9NP90 201 aa8.46□□□□□ -1.06
CAPN3-204ENST00000356316 FGF20Q9NP95 211 aaPredicted RBP8.46□□□□□ -1.06
CAPN3-204ENST00000356316 BABAM2Q9NXR7 383 aa8.46□□□□□ -1.06
CAPN3-204ENST00000356316 ZMAT5Q9UDW3 170 aaKnown RBP8.46□□□□□ -1.06
CAPN3-204ENST00000356316 TRAV39A0A0B4J263 110 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 A0A1W2PPE3 182 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 A0A1W2PPI3 338 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 MCRIP1C9JLW8 97 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 CCRL2O00421 344 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 SDCBPO00560 298 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-204ENST00000356316 GEMIN2O14893 280 aaKnown RBP8.45□□□□□ -1.06
CAPN3-204ENST00000356316 LIMS3P0CW19 117 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 LIMS4P0CW20 117 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 GTF2F2P13984 249 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 SERPINA2P20848 420 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 IL3RAP26951 378 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 SLC6A1P30531 599 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 SSTR5P35346 364 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 ETV1P50549 477 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 RBM11P57052 281 aaKnown RBP8.45□□□□□ -1.06
CAPN3-204ENST00000356316 MPV17LQ2QL34 196 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 UTF1Q5T230 341 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 UNQ9370/PRO34162Q6UXP9 181 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 SLC35E3Q7Z769 313 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 PQLC1Q8N2U9 271 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 C5orf56Q8N8D9 126 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 OR52M1Q8NGK5 317 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 OR2T10Q8NGZ9 312 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 PLPPR1Q8TBJ4 325 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 CCDC107Q8WV48 283 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 IFT22Q9H7X7 185 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 IL36GQ9NZH8 169 aa8.45□□□□□ -1.06
CAPN3-204ENST00000356316 IGHV1-3A0A0C4DH29 117 aa8.44□□□□□ -1.06
CAPN3-204ENST00000356316 HSD17B6O14756 317 aa8.44□□□□□ -1.06
CAPN3-204ENST00000356316 ORC5O43913 435 aa8.44□□□□□ -1.06
CAPN3-204ENST00000356316 RPL23AP62750 156 aaKnown RBP8.44□□□□□ -1.06
CAPN3-204ENST00000356316 ZNF816Q0VGE8 651 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-204ENST00000356316 RIPK1Q13546 671 aa8.44□□□□□ -1.06
CAPN3-204ENST00000356316 DIAPH2-AS1Q14236 149 aa8.44□□□□□ -1.06
CAPN3-204ENST00000356316 SMN1Q16637 294 aaKnown RBP8.44□□□□□ -1.06
CAPN3-204ENST00000356316 SLC22A6Q4U2R8 563 aa8.44□□□□□ -1.06
CAPN3-204ENST00000356316 NHLRC3Q5JS37 347 aa8.44□□□□□ -1.06
CAPN3-204ENST00000356316 OR2G6Q5TZ20 316 aa8.44□□□□□ -1.06
CAPN3-204ENST00000356316 MRPL41Q8IXM3 137 aaKnown RBP8.44□□□□□ -1.06
CAPN3-204ENST00000356316 LINC00482Q8N8I6 264 aa8.44□□□□□ -1.06
CAPN3-204ENST00000356316 APH1BQ8WW43 257 aa8.44□□□□□ -1.06
CAPN3-204ENST00000356316 RGP1Q92546 391 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-204ENST00000356316 GHSRQ92847 366 aa8.44□□□□□ -1.06
CAPN3-204ENST00000356316 NOL4LQ96MY1 436 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-204ENST00000356316 RDH12Q96NR8 316 aa8.44□□□□□ -1.06
CAPN3-204ENST00000356316 ZNF184Q99676 751 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-204ENST00000356316 SPACA1Q9HBV2 294 aa8.44□□□□□ -1.06
CAPN3-204ENST00000356316 SMPD3Q9NY59 655 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-204ENST00000356316 LINC00527Q9UJ94 153 aa8.44□□□□□ -1.06
CAPN3-204ENST00000356316 TRAPPC2LQ9UL33 140 aa8.44□□□□□ -1.06
CAPN3-204ENST00000356316 EXOSC1Q9Y3B2 195 aaKnown RBP8.44□□□□□ -1.06
CAPN3-204ENST00000356316 K7EIL1 84 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 AIPO00170 330 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 AP4M1O00189 453 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 OGG1O15527 345 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 SPINT2O43291 252 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 IGHG2P01859 326 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 MT-ND4P03905 459 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 HOXD3P31249 432 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-204ENST00000356316 MYCNOSP40205 109 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 REG1BP48304 166 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 THBS3P49746 956 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 YIF1BQ5BJH7 314 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 VAX1Q5SQQ9 334 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 LCE2AQ5TA79 106 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-204ENST00000356316 TEX38Q6PEX7 206 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 C8orf86Q6ZUL3 223 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 OR2W3Q7Z3T1 314 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 TGIF2LXQ8IUE1 241 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 ZNF695Q8IW36 515 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 C8orf31Q8N9H6 132 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 KLHL30-AS1Q8NEE0 82 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 SMIM19Q96E16 107 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 MRPS24Q96EL2 167 aaKnown RBP8.43□□□□□ -1.06
CAPN3-204ENST00000356316 TMEM80Q96HE8 168 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 EAF1Q96JC9 268 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-204ENST00000356316 RASL11BQ9BPW5 248 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 DIMT1Q9UNQ2 313 aaKnown RBP8.43□□□□□ -1.06
CAPN3-204ENST00000356316 COL7A1Q02388 2944 aa8.43□□□□□ -1.06
CAPN3-204ENST00000356316 NOTCH3Q9UM47 2321 aa8.42□□□□□ -1.06
CAPN3-204ENST00000356316 IGHV3-72A0A0B4J1Y9 119 aa8.42□□□□□ -1.06
CAPN3-204ENST00000356316 C15orf65H3BRN8 121 aa8.42□□□□□ -1.06
CAPN3-204ENST00000356316 EBAG9O00559 213 aa8.42□□□□□ -1.06
CAPN3-204ENST00000356316 TXNL1O43396 289 aa8.42□□□□□ -1.06
CAPN3-204ENST00000356316 RRP9O43818 475 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms