RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 PGAM5Q96HS1 289 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 YPEL4Q96NS1 127 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 TMEM238C9JI98 176 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 RAB27BO00194 218 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 DVL1O14640 695 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 CRYABP02511 175 aaKnown RBP8.71□□□□□ -1.02
SYNE1-203ENST00000354674 ZNF735P0CB33 412 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 SPOCK1Q08629 439 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 RNPS1Q15287 305 aaKnown RBP8.71□□□□□ -1.02
SYNE1-203ENST00000354674 C3AR1Q16581 482 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 TMEM268Q5VZI3 342 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 OR1P1Q8NH06 330 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 RNF166Q96A37 237 aaPredicted RBP8.71□□□□□ -1.02
SYNE1-203ENST00000354674 REEP6Q96HR9 211 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 GP6Q9HCN6 339 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 FKBP11Q9NYL4 201 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 KLHDC2Q9Y2U9 406 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 SPTBN2O15020 2390 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 CSTBP04080 98 aaKnown RBP8.7□□□□□ -1.02
SYNE1-203ENST00000354674 CSNK1A1P48729 337 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 ACTBP60709 375 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 ACTG1P63261 375 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 NAAAQ02083 359 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 MPV17LQ2QL34 196 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 CARD17Q5XLA6 110 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 SLC22A25Q6T423 547 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 PEG10Q86TG7 708 aaKnown RBP8.7□□□□□ -1.02
SYNE1-203ENST00000354674 OR2AJ1Q8NGZ0 328 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 FNDC9Q8TBE3 224 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 CABLES2Q9BTV7 478 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 FRRS1LQ9P0K9 344 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 CLCF1Q9UBD9 225 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 LAMP3Q9UQV4 416 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 TMEM14AQ9Y6G1 99 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 RPL36A-HNRNPH2H7BZ11 118 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 MPZL1O95297 269 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 LMO1P25800 156 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 UNQ5815/PRO19632Q6UWF5 114 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 SLC25A42Q86VD7 318 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 TMEM183AQ8IXX5 376 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 Q8NA96 180 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 RPS4Y2Q8TD47 263 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 SARAFQ96BY9 339 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 NUDT11Q96G61 164 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 ZC2HC1AQ96GY0 325 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 PITPNC1Q9UKF7 332 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 DOCK11Q5JSL3 2073 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 CACNA1AO00555 2505 aa8.7□□□□□ -1.02
SYNE1-203ENST00000354674 TMEM269A0A1B0GVZ9 245 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 TMEM8BA6NDV4 472 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 ABHD16AO95870 558 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 CALCBP10092 127 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 GNB3P16520 340 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 RAB1AP62820 205 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 GAGE1Q13065 139 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 ANKRD55Q3KP44 614 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 RIPPLY2Q5TAB7 128 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 AAED1Q7RTV5 226 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 DPY19L4Q7Z388 723 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 GPX8Q8TED1 209 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 ASB13Q8WXK3 278 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 LINC00470Q9BZP3 86 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 GAL3ST2Q9H3Q3 398 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 SLC22A13Q9Y226 551 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 CDC14BO60729 498 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 HKR1P10072 659 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 RAB11AP62491 216 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 EIF5AP63241 154 aaKnown RBP8.69□□□□□ -1.02
SYNE1-203ENST00000354674 ROM1Q03395 351 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 MEP1BQ16820 701 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 Q499Y3 187 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 LDLRAD2Q5SZI1 272 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 MYPOPQ86VE0 399 aaPredicted RBP8.69□□□□□ -1.02
SYNE1-203ENST00000354674 STPG4Q8N801 248 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 OR51A2Q8NGJ7 313 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 OR6N2Q8NGY6 317 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 ZCCHC14Q8WYQ9 949 aaKnown RBP8.69□□□□□ -1.02
SYNE1-203ENST00000354674 C11orf40Q8WZ69 217 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 SCRT1Q9BWW7 348 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 FUT9Q9Y231 359 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 ATMQ13315 3056 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 HSPB2A8KAH6 182 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 CD1AP06126 327 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 GLRA1P23415 457 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 GUSBP1Q15486 140 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 RAB11BQ15907 218 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 HSPB2Q16082 182 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 IAH1Q2TAA2 248 aaPredicted RBP8.69□□□□□ -1.02
SYNE1-203ENST00000354674 KRTCAP3Q53RY4 240 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 KIAA2026Q5HYC2 2103 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 PRSS54Q6PEW0 395 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 TUSC5Q8IXB3 177 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 DYRK2Q92630 601 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 NABP1Q96AH0 204 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 SPACA5Q96QH8 159 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 NIPSNAP3BQ9BS92 247 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 PRORYQ9H606 182 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 PLEKHA2Q9HB19 425 aa8.69□□□□□ -1.02
SYNE1-203ENST00000354674 MRM2Q9UI43 246 aaKnown RBP8.69□□□□□ -1.02
SYNE1-203ENST00000354674 ANKRD11Q6UB99 2663 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms