RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 OR2J1Q9GZK6 312 aa6.61□□□□□ -1.35
UBE2D3-204ENST00000349311 SH3BGRL3Q9H299 93 aa6.61□□□□□ -1.35
UBE2D3-204ENST00000349311 SDF2L1Q9HCN8 221 aa6.61□□□□□ -1.35
UBE2D3-204ENST00000349311 LYRM4Q9HD34 91 aa6.61□□□□□ -1.35
UBE2D3-204ENST00000349311 DNAJC4Q9NNZ3 241 aa6.61□□□□□ -1.35
UBE2D3-204ENST00000349311 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.61□□□□□ -1.35
UBE2D3-204ENST00000349311 EHFQ9NZC4 300 aa6.61□□□□□ -1.35
UBE2D3-204ENST00000349311 ZNF346Q9UL40 294 aaKnown RBP6.61□□□□□ -1.35
UBE2D3-204ENST00000349311 SPTBP11277 2137 aa6.61□□□□□ -1.35
UBE2D3-204ENST00000349311 TRAV39A0A0B4J263 110 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 IGKV1-8A0A0C4DH67 115 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 NKX6-3A6NJ46 265 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 A6NNC1 897 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 B4E171 279 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 SRSF10O75494 262 aaKnown RBP6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 SEMA4FO95754 770 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 PNPP00491 289 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 HPRT1P00492 218 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 STATHP02808 62 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 LCATP04180 440 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 PGA3P0DJD8 388 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 CT45A8P0DMV1 189 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 CT45A9P0DMV2 189 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 TDGF1P13385 188 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 CEACAM1P13688 526 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 GLRA1P23415 457 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 FHITP49789 147 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 RAB7AP51149 207 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 PCK2Q16822 640 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 TMEM183BQ1AE95 376 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 CT45A2Q5DJT8 189 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 FAM90A2PQ658T7 463 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 DEGS2Q6QHC5 323 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 ZNF66Q6ZN08 573 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 MAML2Q8IZL2 1156 aaPredicted RBP6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 GBGT1Q8N5D6 347 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 LRTM2Q8N967 370 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 LINC01555Q8NAE3 123 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 OR52N5Q8NH56 324 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 PTPMT1Q8WUK0 201 aaPredicted RBP6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 CORO2AQ92828 525 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 C8orf44Q96CB5 159 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 DAZAP1Q96EP5 407 aaKnown RBP6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 TECTBQ96PL2 329 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 AMELYQ99218 206 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 LPAR4Q99677 370 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 NKX3-1Q99801 234 aaPredicted RBP6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 ZNF2Q9BSG1 426 aaPredicted RBP6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 LYRM2Q9NU23 88 aaPredicted RBP6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 NAT8Q9UHE5 227 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 B9D1Q9UPM9 204 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 RCL1Q9Y2P8 373 aaKnown RBP6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 LRP12Q9Y561 859 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 HEBP2Q9Y5Z4 205 aa6.6□□□□□ -1.35
UBE2D3-204ENST00000349311 TRBV11-1A0A0K0K1C0 115 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 A0A1B0GV50 99 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 AHSA1O95433 338 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 DIRAS3O95661 229 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 GPR75O95800 540 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 MT-CO3P00414 261 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 CSTAP01040 98 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 TYMSP04818 313 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 PFN1P07737 140 aaKnown RBP6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 UMODP07911 640 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 ASAH2BP0C7U1 165 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 IRF2P14316 349 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 MMP9P14780 707 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 ATP6V0CP27449 155 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 CHRNB4P30926 498 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 GALNSP34059 522 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 SRP14P37108 136 aaKnown RBP6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 ZNF41P51814 821 aaPredicted RBP6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 SRPXP78539 464 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 CCL20P78556 96 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 EWSR1Q01844 656 aaKnown RBP eCLIP6.59□□□□□ -1.355e-7■■■■■ 34.3
UBE2D3-204ENST00000349311 CFHR3Q02985 330 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 RPL18Q07020 188 aaKnown RBP6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 OR5I1Q13606 314 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 ACTL10Q5JWF8 245 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 LCN10Q6JVE6 187 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 ZNF100Q8IYN0 542 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 H1FOOQ8IZA3 346 aaPredicted RBP6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 LGI3Q8N145 548 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 SPEM1Q8N4L4 309 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 DEFB123Q8N688 67 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 ZFP62Q8NB50 900 aaPredicted RBP6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 CADM4Q8NFZ8 388 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 OR2L3Q8NG85 312 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 KCNE4Q8WWG9 221 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 TSLPQ969D9 159 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 RITA1Q96K30 269 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 BMFQ96LC9 184 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 TBX15Q96SF7 602 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 SPIN2AQ99865 258 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 SPIN2BQ9BPZ2 258 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 NUDT22Q9BRQ3 303 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 AGMATQ9BSE5 352 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 LPAR5Q9H1C0 372 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 NAA60Q9H7X0 242 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 MMP25Q9NPA2 562 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms