RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 UCN2Q96RP3 112 aa20.22■□□□□ 0.83
NPAS3-201ENST00000346562 LRP5O75197 1615 aa20.22■□□□□ 0.83
NPAS3-201ENST00000346562 STAG3L2P0CL84 134 aa20.22■□□□□ 0.83
NPAS3-201ENST00000346562 C19orf57Q0VDD7 668 aa20.22■□□□□ 0.83
NPAS3-201ENST00000346562 ISXQ2M1V0 245 aa20.22■□□□□ 0.83
NPAS3-201ENST00000346562 EID2BQ96D98 161 aa20.22■□□□□ 0.83
NPAS3-201ENST00000346562 C1QL3Q5VWW1 255 aa20.22■□□□□ 0.83
NPAS3-201ENST00000346562 GPX7Q96SL4 187 aaPredicted RBP20.22■□□□□ 0.83
NPAS3-201ENST00000346562 NUMA1Q14980 2115 aa20.22■□□□□ 0.83
NPAS3-201ENST00000346562 RREB1Q92766 1687 aa20.22■□□□□ 0.83
NPAS3-201ENST00000346562 FAM157CP0CG43 387 aa20.21■□□□□ 0.83
NPAS3-201ENST00000346562 LOXL4Q96JB6 756 aa20.21■□□□□ 0.83
NPAS3-201ENST00000346562 CHST5Q9GZS9 411 aa20.21■□□□□ 0.83
NPAS3-201ENST00000346562 VAX2Q9UIW0 290 aa20.21■□□□□ 0.83
NPAS3-201ENST00000346562 TCL1AP56279 114 aa20.21■□□□□ 0.83
NPAS3-201ENST00000346562 ROM1Q03395 351 aa20.21■□□□□ 0.83
NPAS3-201ENST00000346562 GBGT1Q8N5D6 347 aa20.21■□□□□ 0.83
NPAS3-201ENST00000346562 FAM24BQ8N5W8 94 aa20.21■□□□□ 0.83
NPAS3-201ENST00000346562 GHITMQ9H3K2 345 aa20.21■□□□□ 0.83
NPAS3-201ENST00000346562 RPL31P62899 125 aaKnown RBP20.21■□□□□ 0.83
NPAS3-201ENST00000346562 FAM74A3Q4VXF1 159 aa20.21■□□□□ 0.83
NPAS3-201ENST00000346562 STPG1Q5TH74 334 aa20.21■□□□□ 0.83
NPAS3-201ENST00000346562 FAM219BQ5XKK7 198 aa20.21■□□□□ 0.83
NPAS3-201ENST00000346562 GLI3P10071 1580 aa20.21■□□□□ 0.83
NPAS3-201ENST00000346562 K7N7A8 449 aa20.21■□□□□ 0.83
NPAS3-201ENST00000346562 FAM106CPP0CH98 169 aa20.21■□□□□ 0.83
NPAS3-201ENST00000346562 C9orf40Q8IXQ3 194 aa20.21■□□□□ 0.83
NPAS3-201ENST00000346562 SHISA5Q8N114 240 aa20.21■□□□□ 0.83
NPAS3-201ENST00000346562 HSPB8Q9UJY1 196 aa20.21■□□□□ 0.83
NPAS3-201ENST00000346562 B4DEV8 164 aa20.2■□□□□ 0.82
NPAS3-201ENST00000346562 ADAP1O75689 374 aa20.2■□□□□ 0.82
NPAS3-201ENST00000346562 SULT1A2P50226 295 aa20.2■□□□□ 0.82
NPAS3-201ENST00000346562 AESQ08117 197 aa20.2■□□□□ 0.82
NPAS3-201ENST00000346562 RRN3P1Q2M238 152 aa20.2■□□□□ 0.82
NPAS3-201ENST00000346562 PIGYQ3MUY2 71 aa20.2■□□□□ 0.82
NPAS3-201ENST00000346562 RNF133Q8WVZ7 376 aa20.2■□□□□ 0.82
NPAS3-201ENST00000346562 IL22RA2Q969J5 263 aa20.2■□□□□ 0.82
NPAS3-201ENST00000346562 BET1LQ9NYM9 111 aa20.2■□□□□ 0.82
NPAS3-201ENST00000346562 ISLRO14498 428 aa20.2■□□□□ 0.82
NPAS3-201ENST00000346562 INPP5JQ15735 1006 aaPredicted RBP20.2■□□□□ 0.82
NPAS3-201ENST00000346562 ELOA3CA0A087WX78 387 aaPredicted RBP20.2■□□□□ 0.82
NPAS3-201ENST00000346562 HELTA6NFD8 242 aa20.2■□□□□ 0.82
NPAS3-201ENST00000346562 FFAR1O14842 300 aa20.2■□□□□ 0.82
NPAS3-201ENST00000346562 UBE2L6O14933 153 aa20.2■□□□□ 0.82
NPAS3-201ENST00000346562 RAB29O14966 203 aa20.2■□□□□ 0.82
NPAS3-201ENST00000346562 HIST3H3Q16695 136 aa20.2■□□□□ 0.82
NPAS3-201ENST00000346562 PRSS50Q9UI38 385 aa20.2■□□□□ 0.82
NPAS3-201ENST00000346562 B2MP61769 119 aa20.19■□□□□ 0.82
NPAS3-201ENST00000346562 PMS2CLQ68D20 193 aa20.19■□□□□ 0.82
NPAS3-201ENST00000346562 PIMREGQ9BSJ6 248 aa20.19■□□□□ 0.82
NPAS3-201ENST00000346562 J3QR06 171 aa20.19■□□□□ 0.82
NPAS3-201ENST00000346562 CORTO00230 105 aa20.19■□□□□ 0.82
NPAS3-201ENST00000346562 APELAP0DMC3 54 aa20.19■□□□□ 0.82
NPAS3-201ENST00000346562 GGTLC2Q14390 218 aa20.19■□□□□ 0.82
NPAS3-201ENST00000346562 SPANXN1Q5VSR9 72 aa20.19■□□□□ 0.82
NPAS3-201ENST00000346562 IFNL4K9M1U5 179 aa20.19■□□□□ 0.82
NPAS3-201ENST00000346562 PRDX2P32119 198 aa20.19■□□□□ 0.82
NPAS3-201ENST00000346562 SLC35E3Q7Z769 313 aa20.19■□□□□ 0.82
NPAS3-201ENST00000346562 ZNF721Q8TF20 911 aa20.19■□□□□ 0.82
NPAS3-201ENST00000346562 MRGPRFQ96AM1 343 aa20.19■□□□□ 0.82
NPAS3-201ENST00000346562 TRAV34A0A0B4J273 112 aa20.19■□□□□ 0.82
NPAS3-201ENST00000346562 ADRA2AP08913 450 aa20.19■□□□□ 0.82
NPAS3-201ENST00000346562 SYT8Q8NBV8 401 aa20.19■□□□□ 0.82
NPAS3-201ENST00000346562 SMIM12Q96EX1 92 aa20.19■□□□□ 0.82
NPAS3-201ENST00000346562 SLC25A33Q9BSK2 321 aa20.19■□□□□ 0.82
NPAS3-201ENST00000346562 ZNF253O75346 499 aa20.18■□□□□ 0.82
NPAS3-201ENST00000346562 A0A1W2PS18 150 aa20.18■□□□□ 0.82
NPAS3-201ENST00000346562 GAPDHP04406 335 aaKnown RBP20.18■□□□□ 0.82
NPAS3-201ENST00000346562 CALHM1Q8IU99 346 aa20.18■□□□□ 0.82
NPAS3-201ENST00000346562 SLC2A9Q9NRM0 540 aa20.18■□□□□ 0.82
NPAS3-201ENST00000346562 TNRC6CQ9HCJ0 1690 aaKnown RBP20.18■□□□□ 0.82
NPAS3-201ENST00000346562 SS18L1O75177 396 aaPredicted RBP20.18■□□□□ 0.82
NPAS3-201ENST00000346562 PGA4P0DJD7 388 aa20.18■□□□□ 0.82
NPAS3-201ENST00000346562 PGA5P0DJD9 388 aa20.18■□□□□ 0.82
NPAS3-201ENST00000346562 LRRC75BQ2VPJ9 315 aa20.18■□□□□ 0.82
NPAS3-201ENST00000346562 PARP11Q9NR21 331 aa20.18■□□□□ 0.82
NPAS3-201ENST00000346562 NEU3Q9UQ49 428 aa20.17■□□□□ 0.82
NPAS3-201ENST00000346562 NHSL1Q5SYE7 1610 aa20.17■□□□□ 0.82
NPAS3-201ENST00000346562 HPRT1P00492 218 aa20.17■□□□□ 0.82
NPAS3-201ENST00000346562 SRSF9Q13242 221 aaKnown RBP eCLIP20.17■□□□□ 0.82
NPAS3-201ENST00000346562 TMEM255AQ5JRV8 349 aa20.17■□□□□ 0.82
NPAS3-201ENST00000346562 PRR13Q9NZ81 148 aa20.17■□□□□ 0.82
NPAS3-201ENST00000346562 HRKO00198 91 aa20.17■□□□□ 0.82
NPAS3-201ENST00000346562 PSG2P11465 335 aa20.17■□□□□ 0.82
NPAS3-201ENST00000346562 EWSR1Q01844 656 aaKnown RBP eCLIP20.17■□□□□ 0.82
NPAS3-201ENST00000346562 GUCA2BQ16661 112 aa20.17■□□□□ 0.82
NPAS3-201ENST00000346562 FADS6Q8N9I5 356 aa20.17■□□□□ 0.82
NPAS3-201ENST00000346562 SPINT1O43278 529 aa20.17■□□□□ 0.82
NPAS3-201ENST00000346562 GCSAMQ8N6F7 178 aa20.17■□□□□ 0.82
NPAS3-201ENST00000346562 OR10J6PQ8NGY7 276 aa20.17■□□□□ 0.82
NPAS3-201ENST00000346562 OR2J1Q9GZK6 312 aa20.17■□□□□ 0.82
NPAS3-201ENST00000346562 OPN3Q9H1Y3 402 aaPredicted RBP20.17■□□□□ 0.82
NPAS3-201ENST00000346562 DDA1Q9BW61 102 aa20.17■□□□□ 0.82
NPAS3-201ENST00000346562 FTH1P19P0C7X4 201 aa20.16■□□□□ 0.82
NPAS3-201ENST00000346562 TMEM50BP56557 158 aa20.16■□□□□ 0.82
NPAS3-201ENST00000346562 P2RY6Q15077 328 aa20.16■□□□□ 0.82
NPAS3-201ENST00000346562 C19orf54Q5BKX5 351 aa20.16■□□□□ 0.82
NPAS3-201ENST00000346562 DPPA3Q6W0C5 159 aa20.16■□□□□ 0.82
NPAS3-201ENST00000346562 CDS2O95674 445 aa20.16■□□□□ 0.82
NPAS3-201ENST00000346562 ADAMTS17Q8TE56 1095 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms