RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 HLA-DRB5Q30154 266 aa12.75□□□□□ -0.37
TSPAN4-201ENST00000346501 C6orf183Q5T699 404 aa12.75□□□□□ -0.37
TSPAN4-201ENST00000346501 FAM27D1Q5T7N8 215 aa12.75□□□□□ -0.37
TSPAN4-201ENST00000346501 OR6M1Q8NGM8 313 aa12.75□□□□□ -0.37
TSPAN4-201ENST00000346501 RFESDQ8TAC1 157 aa12.75□□□□□ -0.37
TSPAN4-201ENST00000346501 WFDC12Q8WWY7 111 aa12.75□□□□□ -0.37
TSPAN4-201ENST00000346501 RPEQ96AT9 228 aa12.75□□□□□ -0.37
TSPAN4-201ENST00000346501 AJUBAQ96IF1 538 aa12.75□□□□□ -0.37
TSPAN4-201ENST00000346501 KCNIP1Q9NZI2 227 aa12.75□□□□□ -0.37
TSPAN4-201ENST00000346501 BUB1B-PAK6H3BSN5 160 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 TIMM23O14925 209 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 SPINT2O43291 252 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 ORC5O43913 435 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 PEX14O75381 377 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 SC5DO75845 299 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 BPNT1O95861 308 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 PAX6P26367 422 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 MAP2K4P45985 399 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 RPS25P62851 125 aaKnown RBP12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 TMEM30BQ3MIR4 351 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 C1orf100Q5SVJ3 147 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 OR4P4Q8NGL7 312 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 OR10X1Q8NGY0 326 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 ARL11Q969Q4 196 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 FAM46BQ96A09 425 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 Q96M66 194 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 URM1Q9BTM9 101 aaKnown RBP12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 TMEM59Q9BXS4 323 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 MMP28Q9H239 520 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 ZNF286AQ9HBT8 521 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 FBLN5Q9UBX5 448 aa12.74□□□□□ -0.37
TSPAN4-201ENST00000346501 NPIPB11E5RHQ5 1161 aa12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 PDCD5O14737 125 aa12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 DENRO43583 198 aaKnown RBP12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 PDCD6O75340 191 aa12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 IGLV1-47P01700 117 aa12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 LPLP06858 475 aa12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 CGB3P0DN86 165 aa12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 CGB7P0DN87 165 aa12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 CALRP27797 417 aaKnown RBP12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 KIR2DS4P43632 304 aa12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 RAB13P51153 203 aa12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 MADCAM1Q13477 382 aa12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 ZNF497Q6ZNH5 498 aa12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 LRRTM1Q86UE6 522 aa12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 CCDC107Q8WV48 283 aa12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 FCGR1BQ92637 280 aa12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 TOMM40LQ969M1 308 aa12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 PRSS22Q9GZN4 317 aa12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 LINC00574Q9H8X3 128 aa12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 RCC2Q9P258 522 aaKnown RBP12.73□□□□□ -0.37
TSPAN4-201ENST00000346501 J3QR06 171 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 M0QZ24 198 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 SDCBPO00560 298 aaPredicted RBP12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 MT-ND4P03905 459 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 ARSBP15848 533 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 MYL9P24844 172 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 IL3RAP26951 378 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 SSTR5P35346 364 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 GDNFP39905 211 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 RAB11BQ15907 218 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 NKAPLQ5M9Q1 402 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 TPTE2P1Q5T6R2 138 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 SYT6Q5T7P8 510 aaPredicted RBP12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 Q6ZTK2 550 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 C16orf82Q7Z2V1 217 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 LYPD6Q86Y78 171 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 DYNAPQ8N1N2 210 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 TMEM104Q8NE00 496 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 OR52M1Q8NGK5 317 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 ZNF696Q9H7X3 374 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 RRP15Q9Y3B9 282 aaKnown RBP12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 LRRC42Q9Y546 428 aa12.72□□□□□ -0.37
TSPAN4-201ENST00000346501 TRAV39A0A0B4J263 110 aa12.71□□□□□ -0.37
TSPAN4-201ENST00000346501 UBE2QL1A1L167 161 aa12.71□□□□□ -0.37
TSPAN4-201ENST00000346501 A6NDX4 124 aa12.71□□□□□ -0.37
TSPAN4-201ENST00000346501 SLC22A1O15245 554 aa12.71□□□□□ -0.37
TSPAN4-201ENST00000346501 FAM106CPP0CH98 169 aa12.71□□□□□ -0.37
TSPAN4-201ENST00000346501 VSIG8P0DPA2 414 aa12.71□□□□□ -0.37
TSPAN4-201ENST00000346501 GNG10P50151 68 aa12.71□□□□□ -0.37
TSPAN4-201ENST00000346501 RAB7AP51149 207 aa12.71□□□□□ -0.37
TSPAN4-201ENST00000346501 PROK1P58294 105 aa12.71□□□□□ -0.37
TSPAN4-201ENST00000346501 EMX1Q04741 257 aaPredicted RBP12.71□□□□□ -0.37
TSPAN4-201ENST00000346501 BAIAP2L2Q6UXY1 529 aa12.71□□□□□ -0.37
TSPAN4-201ENST00000346501 TMEM91Q6ZNR0 172 aa12.71□□□□□ -0.37
TSPAN4-201ENST00000346501 TMEM219Q86XT9 240 aa12.71□□□□□ -0.37
TSPAN4-201ENST00000346501 OR4K15Q8NH41 348 aa12.71□□□□□ -0.37
TSPAN4-201ENST00000346501 PIFOQ8TCI5 191 aa12.71□□□□□ -0.37
TSPAN4-201ENST00000346501 ZNF581Q9P0T4 197 aa12.71□□□□□ -0.37
TSPAN4-201ENST00000346501 GNG12Q9UBI6 72 aa12.71□□□□□ -0.37
TSPAN4-201ENST00000346501 PSG11Q9UQ72 335 aa12.71□□□□□ -0.37
TSPAN4-201ENST00000346501 CCRL2O00421 344 aa12.7□□□□□ -0.38
TSPAN4-201ENST00000346501 SLC17A2O00624 439 aa12.7□□□□□ -0.38
TSPAN4-201ENST00000346501 PSMB9P28065 219 aa12.7□□□□□ -0.38
TSPAN4-201ENST00000346501 GP2P55259 537 aaKnown RBP12.7□□□□□ -0.38
TSPAN4-201ENST00000346501 RPS27AP62979 156 aaKnown RBP12.7□□□□□ -0.38
TSPAN4-201ENST00000346501 FABP5Q01469 135 aa12.7□□□□□ -0.38
TSPAN4-201ENST00000346501 Q3ZCU0 254 aa12.7□□□□□ -0.38
TSPAN4-201ENST00000346501 OR2W3Q7Z3T1 314 aa12.7□□□□□ -0.38
TSPAN4-201ENST00000346501 ZNF554Q86TJ5 538 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms