RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 TMEM241Q24JQ0 296 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 BSXQ3C1V8 233 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 NKAIN1Q4KMZ8 207 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 TMEM41BQ5BJD5 291 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 C1orf189Q5VU69 101 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 ANKRD37Q7Z713 158 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 C17orf78Q8N4C9 275 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 GBGT1Q8N5D6 347 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 FADS6Q8N9I5 356 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 SMIM7Q9BQ49 75 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 ATG101Q9BSB4 218 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 SEMA5BQ9P283 1151 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 ADAMTS20P59510 1910 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 IGKV1D-13A0A0B4J2D9 117 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 PIGBOS1A0A0B4J2F0 54 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 A0A1W2PPC4 97 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 H7BYZ3 331 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 HLA-HP01893 362 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 OPN1LWP04000 364 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 IGKV1-13P0DP09 117 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 ADIRFQ15847 76 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 RSPO4Q2I0M5 234 aaPredicted RBP8.29□□□□□ -1.08
HOXA1-201ENST00000343060 LRRC75BQ2VPJ9 315 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 OR2AE1Q8NHA4 323 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 PINX1Q96BK5 328 aaKnown RBP8.29□□□□□ -1.08
HOXA1-201ENST00000343060 OR5B12Q96R08 314 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 RBKSQ9H477 322 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 PLEK2Q9NYT0 353 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 ZNF391Q9UJN7 358 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 IGLV3-12A0A075B6K2 115 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 A0A0G2JRQ6 117 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 MAP1LC3B2A6NCE7 125 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 M0QZK8 103 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 SYNGR3O43761 229 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 NAPSAO96009 420 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 NRASP01111 189 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 SRP14P37108 136 aaKnown RBP8.29□□□□□ -1.08
HOXA1-201ENST00000343060 FUT6P51993 359 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 MRPS34P82930 218 aaKnown RBP8.29□□□□□ -1.08
HOXA1-201ENST00000343060 TMEM267Q0VDI3 215 aaPredicted RBP8.29□□□□□ -1.08
HOXA1-201ENST00000343060 FAM27BQ5VT28 67 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 CISD2Q8N5K1 135 aaKnown RBP8.29□□□□□ -1.08
HOXA1-201ENST00000343060 SCGB1C1Q8TD33 95 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 BADQ92934 168 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 ANAPC16Q96DE5 110 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 MAP1LC3BQ9GZQ8 125 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 OR6C3Q9NZP0 311 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 MYOTQ9UBF9 498 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 MMP17Q9ULZ9 603 aa8.29□□□□□ -1.08
HOXA1-201ENST00000343060 POLR3KQ9Y2Y1 108 aaPredicted RBP8.29□□□□□ -1.08
HOXA1-201ENST00000343060 DKK1O94907 266 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 FGF8P55075 233 aaPredicted RBP8.28□□□□□ -1.08
HOXA1-201ENST00000343060 ERVS71-1P61550 626 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 MEF2BQ02080 365 aaPredicted RBP8.28□□□□□ -1.08
HOXA1-201ENST00000343060 HERPUD1Q15011 391 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 SPIN3Q5JUX0 258 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 SLC25A24Q6NUK1 477 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 HAPLN4Q86UW8 402 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 THAP3Q8WTV1 239 aaPredicted RBP8.28□□□□□ -1.08
HOXA1-201ENST00000343060 TECTBQ96PL2 329 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 PCGF1Q9BSM1 259 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 ZNF442Q9H7R0 627 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 CBLN4Q9NTU7 201 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 KIAA2026Q5HYC2 2103 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 XIRP2A4UGR9 3374 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 TRBV11-1A0A0K0K1C0 115 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 hCG_38984A0A1B0GV85 526 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 LRRC3CA6NJW4 275 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 DLEU1O43261 78 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 G0S2P27469 103 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 LCN2P80188 198 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 ZNF92Q03936 586 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 RHBDD2Q6NTF9 364 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 OR10G3Q8NGC4 313 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 LMX1AQ8TE12 382 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 EXTL1Q92935 676 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 GPR146Q96CH1 333 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 IMMP2LQ96T52 175 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 ELOVL1Q9BW60 279 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 OR51I2Q9H344 312 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 METTL7AQ9H8H3 244 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 TIMM9Q9Y5J7 89 aa8.28□□□□□ -1.08
HOXA1-201ENST00000343060 KNL1Q8NG31 2342 aa8.27□□□□□ -1.08
HOXA1-201ENST00000343060 USP34Q70CQ2 3546 aa8.27□□□□□ -1.08
HOXA1-201ENST00000343060 CCDC163A0A0D9SF12 145 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 OR6C6A6NF89 314 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 ZNF737O75373 536 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 CNOT4O95628 575 aaKnown RBP8.27□□□□□ -1.09
HOXA1-201ENST00000343060 LINC00614P0C842 121 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 FOXL2P58012 376 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 ARL16Q0P5N6 197 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 MRPL41Q8IXM3 137 aaKnown RBP8.27□□□□□ -1.09
HOXA1-201ENST00000343060 ZNF385AQ96PM9 386 aaKnown RBP8.27□□□□□ -1.09
HOXA1-201ENST00000343060 WDR61Q9GZS3 305 aaKnown RBP8.27□□□□□ -1.09
HOXA1-201ENST00000343060 FUT9Q9Y231 359 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 PIAS3Q9Y6X2 628 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 RTTNQ86VV8 2226 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 H3BP45 60 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 PGLYRP1O75594 196 aaPredicted RBP8.27□□□□□ -1.09
HOXA1-201ENST00000343060 NXPH3O95157 252 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms