RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 BBC3Q96PG8 261 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-202ENST00000339438 UHRF2Q96PU4 802 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 KLHDC3Q9BQ90 382 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 FAM60AQ9NP50 221 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 B3GALT5Q9Y2C3 310 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 PXMP4Q9Y6I8 212 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 CACNA1GO43497 2377 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 IGLV1-36A0A0B4J1U3 117 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 A0A1W2PP11 408 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 HSD11B1P28845 292 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 GFERP55789 205 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 FOXL2P58012 376 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 HIST1H3AP68431 136 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 BTN3A2P78410 334 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 EXT1Q16394 746 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 PRICKLE4Q2TBC4 344 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 OCIAD2Q56VL3 154 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 WDR74Q6RFH5 385 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-202ENST00000339438 ASCL4Q6XD76 172 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 LYZL2Q7Z4W2 148 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 ZNF321PQ8N8H1 164 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 OR2L3Q8NG85 312 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 FNDC9Q8TBE3 224 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 GPR119Q8TDV5 335 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 ADAT3Q96EY9 351 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-202ENST00000339438 CCDC74BQ96LY2 380 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 TIMM29Q9BSF4 260 aa4.81□□□□□ -1.64
CSDE1-202ENST00000339438 SF3B5Q9BWJ5 86 aaKnown RBP4.81□□□□□ -1.64
CSDE1-202ENST00000339438 LOC107986453A0A1B0GWG9 222 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 MEGF11A6BM72 1044 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 A6NJY4 79 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 LMO7DNF2Z398 122 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 WISP1O95388 367 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 ARL4DP49703 201 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 MTCP1P56278 107 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 RPS20P60866 119 aaKnown RBP4.8□□□□□ -1.64
CSDE1-202ENST00000339438 RPL23AP62750 156 aaKnown RBP4.8□□□□□ -1.64
CSDE1-202ENST00000339438 RPL23P62829 140 aaKnown RBP4.8□□□□□ -1.64
CSDE1-202ENST00000339438 DGAT2L6Q6ZPD8 337 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 PRSS41Q7RTY9 318 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 GRINAQ7Z429 371 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 MARCH3Q86UD3 253 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 TMEM52Q8NDY8 209 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 OR56B2PQ8NGI1 322 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 ZNF519Q8TB69 540 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 NUDT11Q96G61 164 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 CIB3Q96Q77 187 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-202ENST00000339438 TRIM2Q9C040 744 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 VN1R1Q9GZP7 353 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 RPH3ALQ9UNE2 315 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 LAMP3Q9UQV4 416 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 PAM16Q9Y3D7 125 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 ARID1AO14497 2285 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 J3QW42 95 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 FGF17O60258 216 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 HYPMO75409 117 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 NKX2-2O95096 273 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 CTSDP07339 412 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-202ENST00000339438 IGLC2P0DOY2 106 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 IGLC3P0DOY3 106 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 BCL2P10415 239 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 ZNF17P17021 662 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 CMPK1P30085 196 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 OR1D5P58170 312 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 RUNX1Q01196 453 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 POU3F1Q03052 451 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-202ENST00000339438 EMC4Q5J8M3 183 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 UNQ5815/PRO19632Q6UWF5 114 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 DPPA3Q6W0C5 159 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 OOSP2Q86WS3 158 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 CISD2Q8N5K1 135 aaKnown RBP4.8□□□□□ -1.64
CSDE1-202ENST00000339438 OR4F17Q8NGA8 305 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 OR4N2Q8NGD1 307 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 TMEM56Q96MV1 263 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 MS4A10Q96PG2 267 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 OR4F4Q96R69 305 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 LMF2Q9BU23 707 aaKnown RBP4.8□□□□□ -1.64
CSDE1-202ENST00000339438 CST9LQ9H4G1 147 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 MMP25Q9NPA2 562 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 MRPL27Q9P0M9 148 aaKnown RBP4.8□□□□□ -1.64
CSDE1-202ENST00000339438 HSPB7Q9UBY9 170 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 TMEM56-RWDD3S4R434 201 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 F6UZH7 168 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 AQP7O14520 342 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 PRKNO60260 465 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-202ENST00000339438 OR6A2O95222 327 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 IFNA21P01568 189 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 FAHP16930 419 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 LHX2P50458 406 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 BLKP51451 505 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 ARG2P78540 354 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 RPL18Q07020 188 aaKnown RBP4.8□□□□□ -1.64
CSDE1-202ENST00000339438 ZNF141Q15928 474 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 FBLN7Q53RD9 439 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 LYSMD4Q5XG99 296 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 IGFL2Q6UWQ7 119 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 CYP2G1PQ6ZSU1 146 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 COX15Q7KZN9 410 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 SMIM15Q7Z3B0 74 aa4.8□□□□□ -1.64
CSDE1-202ENST00000339438 VN1R4Q7Z5H5 301 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms