RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 OR56B1Q8NGI3 324 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 NEK7Q8TDX7 302 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 SOSTQ9BQB4 213 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 PATZ1Q9HBE1 687 aaKnown RBP13.67□□□□□ -0.22
SHOX-201ENST00000334060 SLC25A10Q9UBX3 287 aaPredicted RBP13.67□□□□□ -0.22
SHOX-201ENST00000334060 KIF25Q9UIL4 384 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 CREBBPQ92793 2442 aa13.66□□□□□ -0.22
SHOX-201ENST00000334060 KIAA1324LA8MWY0 1029 aaPredicted RBP13.66□□□□□ -0.22
SHOX-201ENST00000334060 F5H0A9 414 aaPredicted RBP13.66□□□□□ -0.22
SHOX-201ENST00000334060 TRIM77I1YAP6 450 aa13.66□□□□□ -0.22
SHOX-201ENST00000334060 LYRM1O43325 122 aa13.66□□□□□ -0.22
SHOX-201ENST00000334060 XRCC3O43542 346 aa13.66□□□□□ -0.22
SHOX-201ENST00000334060 RCC1P18754 421 aaPredicted RBP13.66□□□□□ -0.22
SHOX-201ENST00000334060 INPP1P49441 399 aa13.66□□□□□ -0.22
SHOX-201ENST00000334060 SCAND1P57086 179 aa13.66□□□□□ -0.22
SHOX-201ENST00000334060 DGCR2P98153 550 aa13.66□□□□□ -0.22
SHOX-201ENST00000334060 ZNF273Q14593 569 aa13.66□□□□□ -0.22
SHOX-201ENST00000334060 ZNF680Q8NEM1 530 aa13.66□□□□□ -0.22
SHOX-201ENST00000334060 S100A16Q96FQ6 103 aaKnown RBP13.66□□□□□ -0.22
SHOX-201ENST00000334060 MMP26Q9NRE1 261 aa13.66□□□□□ -0.22
SHOX-201ENST00000334060 CSPG4Q6UVK1 2322 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 METTL21EPA6NDL7 271 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 IFNL4K9M1U5 179 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 DHFRP00374 187 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 CHRM2P08172 466 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 TMEM155Q4W5P6 130 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 WDR25Q64LD2 544 aaPredicted RBP13.65□□□□□ -0.22
SHOX-201ENST00000334060 OR13A1Q8NGR1 328 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 H1FXQ92522 213 aaKnown RBP13.65□□□□□ -0.22
SHOX-201ENST00000334060 IFT22Q9H7X7 185 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 RHOFQ9HBH0 211 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 MYOZ1Q9NP98 299 aaPredicted RBP13.65□□□□□ -0.22
SHOX-201ENST00000334060 MED9Q9NWA0 146 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 PCDHB10Q9UN67 800 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 TLN2Q9Y4G6 2542 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 A0A0B4J293 547 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 CCL3L1P16619 93 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 IL18Q14116 193 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 ZNF561Q8N587 486 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 MRPL30Q8TCC3 161 aaKnown RBP13.65□□□□□ -0.22
SHOX-201ENST00000334060 ZNF431Q8TF32 576 aaPredicted RBP13.65□□□□□ -0.22
SHOX-201ENST00000334060 MRI1Q9BV20 369 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 KAAG1Q9UBP8 84 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 SESN1Q9Y6P5 492 aa13.65□□□□□ -0.22
SHOX-201ENST00000334060 DOCK11Q5JSL3 2073 aa13.65□□□□□ -0.23
SHOX-201ENST00000334060 DSCAML1Q8TD84 2053 aa13.64□□□□□ -0.23
SHOX-201ENST00000334060 NKX6-3A6NJ46 265 aa13.64□□□□□ -0.23
SHOX-201ENST00000334060 INMT-MINDY4F8WBC2 141 aa13.64□□□□□ -0.23
SHOX-201ENST00000334060 I3L521 148 aa13.64□□□□□ -0.23
SHOX-201ENST00000334060 SMAD7O15105 426 aaKnown RBP13.64□□□□□ -0.23
SHOX-201ENST00000334060 CD3GP09693 182 aa13.64□□□□□ -0.23
SHOX-201ENST00000334060 FIP1L1Q6UN15 594 aaKnown RBP13.64□□□□□ -0.23
SHOX-201ENST00000334060 BTN2A1Q7KYR7 527 aa13.64□□□□□ -0.23
SHOX-201ENST00000334060 MUC20Q8N307 709 aaPredicted RBP13.64□□□□□ -0.23
SHOX-201ENST00000334060 RAB40AQ8WXH6 277 aa13.64□□□□□ -0.23
SHOX-201ENST00000334060 SNX22Q96L94 193 aa13.64□□□□□ -0.23
SHOX-201ENST00000334060 FOXC2Q99958 501 aa13.64□□□□□ -0.23
SHOX-201ENST00000334060 REG4Q9BYZ8 158 aa13.64□□□□□ -0.23
SHOX-201ENST00000334060 UBQLN2Q9UHD9 624 aa13.64□□□□□ -0.23
SHOX-201ENST00000334060 SLC23A1Q9UHI7 598 aa13.64□□□□□ -0.23
SHOX-201ENST00000334060 YLPM1P49750 1951 aaKnown RBP13.64□□□□□ -0.23
SHOX-201ENST00000334060 MMP23AO75900 390 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 RRASP10301 218 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 OMGP23515 440 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 GDNFP39905 211 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 KRBOX4Q5JUW0 171 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 CD276Q5ZPR3 534 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 OR52I2Q8NH67 350 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 MRGPRDQ8TDS7 321 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 NEIL1Q96FI4 390 aaPredicted RBP13.63□□□□□ -0.23
SHOX-201ENST00000334060 PCDHB16Q9NRJ7 776 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 KLK11Q9UBX7 282 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 FAM90A10PA6NDY2 464 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 FAM90A18PA6NE21 464 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 FAM90A16PA6NEW6 464 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 FAM90A20PA6NIJ5 464 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 FAM90A8PA6NJQ4 464 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 FAM90A7PA6NKC0 464 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 FAM90A22PA8MWA6 464 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 FAM90A12PA8MX19 464 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 FAM90A5PA8MXJ8 464 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 FAM90A23PA8MXZ1 464 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 MCRIP1C9JLW8 97 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 FAM90A15PP0C7V4 464 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 FAM90A13PP0C7W8 464 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 FAM90A14PP0C7W9 464 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 FAM90A24PP0C7X0 464 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 SSTR5P35346 364 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 RAG2P55895 527 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 OR52W1Q6IF63 320 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 ZNF497Q6ZNH5 498 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 SLC36A1Q7Z2H8 476 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 Q8N402 240 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 SPICQ8N5J4 248 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 OR8B3Q8NGG8 313 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 OR8B2Q96RD0 313 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 COPZ2Q9P299 210 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 CLN8Q9UBY8 286 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 WNK2Q9Y3S1 2297 aa13.63□□□□□ -0.23
SHOX-201ENST00000334060 HIVEP1P15822 2718 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms