RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 FAM90A18PA6NE21 464 aa22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 FAM90A16PA6NEW6 464 aa22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 FAM90A20PA6NIJ5 464 aa22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 FAM90A7PA6NKC0 464 aa22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 FAM90A22PA8MWA6 464 aa22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 FAM90A12PA8MX19 464 aa22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 FAM90A5PA8MXJ8 464 aa22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 FAM90A23PA8MXZ1 464 aa22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 MCRIP1C9JLW8 97 aa22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 BUB1B-PAK6H3BSN5 160 aa22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 TIMM23O14925 209 aa22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 FAM90A15PP0C7V4 464 aa22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 FAM90A13PP0C7W8 464 aa22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 FAM90A14PP0C7W9 464 aa22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 FAM90A24PP0C7X0 464 aa22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 BRS3P32247 399 aa22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 GP2P55259 537 aaKnown RBP22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 SPARTQ8N0X7 666 aa22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 RFESDQ8TAC1 157 aa22.23■■□□□ 1.15
ATPAF1-201ENST00000329231 TRAV39A0A0B4J263 110 aa22.22■■□□□ 1.15
ATPAF1-201ENST00000329231 UCHL1P09936 223 aa22.22■■□□□ 1.15
ATPAF1-201ENST00000329231 UBBP0CG47 229 aa22.22■■□□□ 1.15
ATPAF1-201ENST00000329231 SRMP19623 302 aa22.22■■□□□ 1.15
ATPAF1-201ENST00000329231 SSTR5P35346 364 aa22.22■■□□□ 1.15
ATPAF1-201ENST00000329231 SLC16A12Q6ZSM3 486 aa22.22■■□□□ 1.15
ATPAF1-201ENST00000329231 LRRTM1Q86UE6 522 aa22.22■■□□□ 1.15
ATPAF1-201ENST00000329231 TMEM104Q8NE00 496 aa22.22■■□□□ 1.15
ATPAF1-201ENST00000329231 CST11Q9H112 138 aa22.22■■□□□ 1.15
ATPAF1-201ENST00000329231 MMP28Q9H239 520 aa22.22■■□□□ 1.15
ATPAF1-201ENST00000329231 SIGLEC9Q9Y336 463 aa22.22■■□□□ 1.15
ATPAF1-201ENST00000329231 AMMECR1Q9Y4X0 333 aaPredicted RBP22.22■■□□□ 1.15
ATPAF1-201ENST00000329231 EFNB2P52799 333 aa22.21■■□□□ 1.15
ATPAF1-201ENST00000329231 LTC4SQ16873 150 aa22.21■■□□□ 1.15
ATPAF1-201ENST00000329231 UTF1Q5T230 341 aa22.21■■□□□ 1.15
ATPAF1-201ENST00000329231 RAB12Q6IQ22 244 aa22.21■■□□□ 1.15
ATPAF1-201ENST00000329231 ZNF497Q6ZNH5 498 aa22.21■■□□□ 1.15
ATPAF1-201ENST00000329231 TMEM91Q6ZNR0 172 aa22.21■■□□□ 1.15
ATPAF1-201ENST00000329231 Q96M66 194 aa22.21■■□□□ 1.15
ATPAF1-201ENST00000329231 OOSP1A8MZH6 123 aa22.2■■□□□ 1.14
ATPAF1-201ENST00000329231 LY6LH3BQJ8 138 aa22.2■■□□□ 1.14
ATPAF1-201ENST00000329231 J3QR06 171 aa22.2■■□□□ 1.14
ATPAF1-201ENST00000329231 M0QZ24 198 aa22.2■■□□□ 1.14
ATPAF1-201ENST00000329231 AIPO00170 330 aa22.2■■□□□ 1.14
ATPAF1-201ENST00000329231 MT-ND4P03905 459 aa22.2■■□□□ 1.14
ATPAF1-201ENST00000329231 TPTE2P1Q5T6R2 138 aa22.2■■□□□ 1.14
ATPAF1-201ENST00000329231 UBE2UQ5VVX9 321 aa22.2■■□□□ 1.14
ATPAF1-201ENST00000329231 CCDC144NLQ6NUI1 221 aa22.2■■□□□ 1.14
ATPAF1-201ENST00000329231 ZNF773Q6PK81 442 aa22.2■■□□□ 1.14
ATPAF1-201ENST00000329231 PEX16Q9Y5Y5 336 aa22.2■■□□□ 1.14
ATPAF1-201ENST00000329231 GLAP06280 429 aa22.19■■□□□ 1.14
ATPAF1-201ENST00000329231 FUT3P21217 361 aa22.19■■□□□ 1.14
ATPAF1-201ENST00000329231 SSX1Q16384 188 aa22.19■■□□□ 1.14
ATPAF1-201ENST00000329231 C1orf100Q5SVJ3 147 aa22.19■■□□□ 1.14
ATPAF1-201ENST00000329231 TREML4Q6UXN2 200 aa22.19■■□□□ 1.14
ATPAF1-201ENST00000329231 CCDC107Q8WV48 283 aa22.19■■□□□ 1.14
ATPAF1-201ENST00000329231 FCGR1BQ92637 280 aa22.19■■□□□ 1.14
ATPAF1-201ENST00000329231 ARL11Q969Q4 196 aa22.19■■□□□ 1.14
ATPAF1-201ENST00000329231 FAM46BQ96A09 425 aa22.19■■□□□ 1.14
ATPAF1-201ENST00000329231 ETAA1Q9NY74 926 aa22.19■■□□□ 1.14
ATPAF1-201ENST00000329231 PSG11Q9UQ72 335 aa22.19■■□□□ 1.14
ATPAF1-201ENST00000329231 ORC5O43913 435 aa22.18■■□□□ 1.14
ATPAF1-201ENST00000329231 ARL6IP5O75915 188 aa22.18■■□□□ 1.14
ATPAF1-201ENST00000329231 MNDAP41218 407 aa22.18■■□□□ 1.14
ATPAF1-201ENST00000329231 FABP5Q01469 135 aa22.18■■□□□ 1.14
ATPAF1-201ENST00000329231 KCTD21Q4G0X4 260 aa22.18■■□□□ 1.14
ATPAF1-201ENST00000329231 Q8N2B8 174 aa22.18■■□□□ 1.14
ATPAF1-201ENST00000329231 LEAP2Q969E1 77 aa22.18■■□□□ 1.14
ATPAF1-201ENST00000329231 RPEQ96AT9 228 aa22.18■■□□□ 1.14
ATPAF1-201ENST00000329231 PRSS22Q9GZN4 317 aa22.18■■□□□ 1.14
ATPAF1-201ENST00000329231 ZNF702PQ9H963 129 aa22.18■■□□□ 1.14
ATPAF1-201ENST00000329231 NDUFB11Q9NX14 153 aa22.18■■□□□ 1.14
ATPAF1-201ENST00000329231 C15orf65H3BRN8 121 aa22.17■■□□□ 1.14
ATPAF1-201ENST00000329231 CA11O75493 328 aa22.17■■□□□ 1.14
ATPAF1-201ENST00000329231 IGHV3-7P01780 117 aa22.17■■□□□ 1.14
ATPAF1-201ENST00000329231 C16orf82Q7Z2V1 217 aa22.17■■□□□ 1.14
ATPAF1-201ENST00000329231 OR52M1Q8NGK5 317 aa22.17■■□□□ 1.14
ATPAF1-201ENST00000329231 AKR1E2Q96JD6 320 aa22.17■■□□□ 1.14
ATPAF1-201ENST00000329231 RAB9BQ9NP90 201 aa22.17■■□□□ 1.14
ATPAF1-201ENST00000329231 TRAPPC2LQ9UL33 140 aa22.17■■□□□ 1.14
ATPAF1-201ENST00000329231 MGAM2Q2M2H8 2515 aa22.16■■□□□ 1.14
ATPAF1-201ENST00000329231 MPIG6BO95866 241 aa22.16■■□□□ 1.14
ATPAF1-201ENST00000329231 CD37P11049 281 aa22.16■■□□□ 1.14
ATPAF1-201ENST00000329231 HTR2CP28335 458 aa22.16■■□□□ 1.14
ATPAF1-201ENST00000329231 GNG10P50151 68 aa22.16■■□□□ 1.14
ATPAF1-201ENST00000329231 MADCAM1Q13477 382 aa22.16■■□□□ 1.14
ATPAF1-201ENST00000329231 Q6ZTK2 550 aa22.16■■□□□ 1.14
ATPAF1-201ENST00000329231 TOMM40LQ969M1 308 aa22.16■■□□□ 1.14
ATPAF1-201ENST00000329231 PDCD6O75340 191 aa22.15■■□□□ 1.14
ATPAF1-201ENST00000329231 VSIG8P0DPA2 414 aa22.15■■□□□ 1.14
ATPAF1-201ENST00000329231 CD24P25063 80 aa22.15■■□□□ 1.14
ATPAF1-201ENST00000329231 HERPUD1Q15011 391 aa22.15■■□□□ 1.14
ATPAF1-201ENST00000329231 C6orf183Q5T699 404 aa22.15■■□□□ 1.14
ATPAF1-201ENST00000329231 SYT6Q5T7P8 510 aaPredicted RBP22.15■■□□□ 1.14
ATPAF1-201ENST00000329231 SIGIRRQ6IA17 410 aa22.15■■□□□ 1.14
ATPAF1-201ENST00000329231 GAPTQ8N292 157 aa22.15■■□□□ 1.14
ATPAF1-201ENST00000329231 KLHDC1Q8N7A1 406 aa22.15■■□□□ 1.14
ATPAF1-201ENST00000329231 OR6M1Q8NGM8 313 aa22.15■■□□□ 1.14
ATPAF1-201ENST00000329231 OR10X1Q8NGY0 326 aa22.15■■□□□ 1.14
ATPAF1-201ENST00000329231 KCNG3Q8TAE7 436 aa22.15■■□□□ 1.14
ATPAF1-201ENST00000329231 CAPSLQ8WWF8 208 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms