RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 NPVFQ9HCQ7 196 aa0.66□□□□□ -2.3
CCDC144A-201ENST00000328495 MCUBQ9NWR8 336 aa0.66□□□□□ -2.3
CCDC144A-201ENST00000328495 SLC39A1Q9NY26 324 aa0.66□□□□□ -2.3
CCDC144A-201ENST00000328495 UBAP1Q9NZ09 502 aa0.66□□□□□ -2.3
CCDC144A-201ENST00000328495 LGALS13Q9UHV8 139 aa0.66□□□□□ -2.3
CCDC144A-201ENST00000328495 MCTS1Q9ULC4 181 aaKnown RBP0.66□□□□□ -2.3
CCDC144A-201ENST00000328495 STK38LQ9Y2H1 464 aa0.66□□□□□ -2.3
CCDC144A-201ENST00000328495 COMMD3-BMI1R4GMX3 469 aa0.66□□□□□ -2.3
CCDC144A-201ENST00000328495 CNTRLQ7Z7A1 2325 aa0.66□□□□□ -2.3
CCDC144A-201ENST00000328495 IGHV3OR16-8A0A075B7F1 116 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 A0A1B0GW55 424 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 TMEM120BA0PK00 339 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 ZNF98A6NK75 572 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 TMEM210A6NLX4 147 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 MKRN2OSH3BPM6 223 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 M0R3G1 203 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 PRMT5O14744 637 aaPredicted RBP0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 LIN7AO14910 233 aaPredicted RBP0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 RAB29O14966 203 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 RAD51CO43502 376 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 SNAPC5O75971 98 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 H6PDO95479 791 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 ASS1P00966 412 aaKnown RBP0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 CD8AP01732 235 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 ARG1P05089 322 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 ERCC1P07992 297 aaPredicted RBP0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 CD3GP09693 182 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 UQCRFS1P1P0C7P4 283 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 DUX4L2P0CJ85 424 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 DUX4L3P0CJ86 424 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 DUX4L5P0CJ88 424 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 DUX4L6P0CJ89 424 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 DUX4L7P0CJ90 424 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 CCL2P13500 99 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 ZNF250P15622 560 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 LGALS3P17931 250 aaKnown RBP0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 PAX6P26367 422 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 IVDP26440 423 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 HLA-DMAP28067 261 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 CASP1P29466 404 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 APLNRP35414 380 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 TPMTP51580 245 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 DSTNP60981 165 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 ZNF33AQ06730 810 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 MERTKQ12866 999 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 DNAJC3Q13217 504 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 BCL2A1Q16548 175 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 HADHQ16836 314 aaKnown RBP0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 ATP6AP1LQ52LC2 224 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 MPV17L2Q567V2 206 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 PLCXD3Q63HM9 321 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 GUSBP11Q6P575 273 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 SLC35D2Q76EJ3 337 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 PHF5AQ7RTV0 110 aaKnown RBP0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 WDFY1Q8IWB7 410 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 FAM71AQ8IYT1 594 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 TMEM256Q8N2U0 113 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 RNF10Q8N5U6 811 aaKnown RBP0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 INO80EQ8NBZ0 244 aaPredicted RBP0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 OR11H7Q8NGC8 314 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 AKR7LQ8NHP1 331 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 CIRBP-AS1Q8TBR5 109 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 ENKURQ8TC29 256 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 SFXN5Q8TD22 340 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 RPEQ96AT9 228 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 Q96MT0 163 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 TMEM27Q9HBJ8 222 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 PRSS16Q9NQE7 514 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 IMP3Q9NV31 184 aaKnown RBP0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 DUX4Q9UBX2 424 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 HMGXB4Q9UGU5 601 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 ZNF780BQ9Y6R6 833 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 DMDP11532 3685 aa0.65□□□□□ -2.3
CCDC144A-201ENST00000328495 GOLGA8IPA6NC78 632 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 CENPXA8MT69 81 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 ZNF878C9JN71 531 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 C9JQL5 133 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 PHYHO14832 338 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 ERLIN1O75477 346 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 KLHL2O95198 593 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 ACSM4P0C7M7 580 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 C8orf88P0DMB2 117 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 GGT1P19440 569 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 HNRNPH3P31942 346 aaKnown RBP0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 TMED10P49755 219 aaKnown RBP0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 RAB7AP51149 207 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 ZNF121P58317 390 aaPredicted RBP0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 MLF1P58340 268 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 RPS11P62280 158 aaKnown RBP eCLIP0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 LIPEQ05469 1076 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 SYPL2Q5VXT5 272 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 PLET1Q6UQ28 207 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 TRMT10CQ7L0Y3 403 aaKnown RBP0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 OR2W3Q7Z3T1 314 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 PHF13Q86YI8 300 aaPredicted RBP0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 OR4M2Q8NGB6 313 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 OR8J1Q8NGP2 316 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 ANP32BQ92688 251 aaKnown RBP0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 CDKL2Q92772 493 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 FAM19A4Q96LR4 140 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms