RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 ARID1AO14497 2285 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 TRAV39A0A0B4J263 110 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 WNT2P09544 360 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 GSTT2P0CG29 244 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 GLP1RP43220 463 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 OR3A3P47888 321 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 DSCR9P59020 149 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 MEF2CQ06413 473 aaPredicted RBP8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 LRRC75A-AS1Q8N1F1 130 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 ARRDC1Q8N5I2 433 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 MINDY2Q8NBR6 621 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 OR4A4PQ8NGN8 299 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 OR56B4Q8NH76 319 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 MRGPRDQ8TDS7 321 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 CHPT1Q8WUD6 406 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 LURAP1Q96LR2 239 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 CABLES2Q9BTV7 478 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 BPESC1Q9GZL8 116 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 NECAP2Q9NVZ3 263 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 MCUBQ9NWR8 336 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 KCNIP1Q9NZI2 227 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 LPAR3Q9UBY5 353 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 PCDHB10Q9UN67 800 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 NAV2Q8IVL1 2488 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 VWC2LB2RUY7 222 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 DISC1C4P0D8 188 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 GPR37O15354 613 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 AMY2AP04746 511 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 SCTP09683 121 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 ZNF735P0CB33 412 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 SLC6A1P30531 599 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 CR1LQ2VPA4 569 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 DEFB113Q30KQ7 82 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 ZNF782Q6ZMW2 699 aaPredicted RBP8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 OVCH2Q7RTZ1 564 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 ENKURQ8TC29 256 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 NINJ1Q92982 152 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 TAF9BQ9HBM6 251 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 SLC2A8Q9NY64 477 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 EHFQ9NZC4 300 aa8.49□□□□□ -1.05
VIPAS39-201ENST00000327028 TRGV10A0A0A0MS01 117 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 TRBV23-1A0A0A0MS06 115 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 hADV38S2A0JD32 116 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 C12orf77C9JDV5 145 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 DIRAS3O95661 229 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 IFNA6P05013 189 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 CTXN2P0C2S0 81 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 NPY4RP50391 375 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 HERPUD1Q15011 391 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 OXA1LQ15070 435 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 TCF23Q7RTU1 214 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 NRARPQ7Z6K4 114 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 CORO2AQ92828 525 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 SLC6A7Q99884 636 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 DCTN5Q9BTE1 182 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 DPAGT1Q9H3H5 408 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 NARFLQ9H6Q4 476 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 OPN4Q9UHM6 478 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 LINC00312Q9Y6C7 94 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 HECTD1Q9ULT8 2610 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 IGHV2-5P01817 119 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 GZMHP20718 246 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 RPL31P62899 125 aaKnown RBP8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 TRIM16LQ309B1 348 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 PLA1AQ53H76 456 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 IGSF11Q5DX21 431 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 WDR25Q64LD2 544 aaPredicted RBP8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 OR51S1Q8NGJ8 323 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 H1FXQ92522 213 aaKnown RBP8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 PRRT1Q99946 306 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 OCEL1Q9H607 264 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 C19orf12Q9NSK7 152 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 CLN8Q9UBY8 286 aa8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 UBE2J1Q9Y385 318 aaPredicted RBP8.48□□□□□ -1.05
VIPAS39-201ENST00000327028 IGKV1-6A0A0C4DH72 117 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 FAM240BA0A1B0GVZ2 78 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 NPIPB11E5RHQ5 1161 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 C15orf65H3BRN8 121 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 SDCBPO00560 298 aaPredicted RBP8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 HBZP02008 142 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 OR5H8P0DN80 308 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 CGB3P0DN86 165 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 CGB7P0DN87 165 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 SPNP16150 400 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 SSTR5P35346 364 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 SEC61A1P61619 476 aaKnown RBP8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 C5orf24Q7Z6I8 188 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 TMEM17Q86X19 198 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 ZNF565Q8N9K5 539 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 DUSP18Q8NEJ0 188 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 KIRREL1Q96J84 757 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 RAB9BQ9NP90 201 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 CALYQ9NYX4 217 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 COPZ2Q9P299 210 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 SCP2D1Q9UJQ7 156 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 SPINT2O43291 252 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 CCR6P51684 374 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 KIAA2026Q5HYC2 2103 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 CENPSQ8N2Z9 138 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 OR1L1Q8NH94 360 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms